Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AC021269.2-201ENST00000532318 330 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AC090502.2-201ENST00000549267 280 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AC125611.1-201ENST00000549563 229 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 SNORD84-203ENST00000584275 78 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AC144521.1-201ENST00000607148 956 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AC092953.2-201ENST00000608000 699 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AC023158.2-201ENST00000614876 543 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AC090772.4-201ENST00000623599 362 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 MTND2P41-201ENST00000637599 773 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 AC092447.7-201ENST00000422212 1621 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 MTND5P6-201ENST00000422338 1798 ntBASIC3.1□□□□□ -1.91
USP16Q9Y5T5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.1□□□□□ -1.91
USP16Q9Y5T5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 RNU6-413P-201ENST00000384115 107 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 AC007064.1-201ENST00000412238 351 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 VN1R10P-201ENST00000447106 875 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 AC007327.1-201ENST00000447461 264 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 snoU13.15-201ENST00000459407 104 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 RPL36AP51-201ENST00000487216 318 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 RNU6-1225P-201ENST00000516336 65 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 OR10V3P-201ENST00000525712 725 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 BNIP3P24-201ENST00000593398 557 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 AC006329.2-201ENST00000611491 394 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.09□□□□□ -1.91
USP16Q9Y5T5 LINC02211-204ENST00000642024 1070 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 NUP58P1-201ENST00000502546 1738 ntBASIC3.09□□□□□ -1.91
USP16Q9Y5T5 AC016717.2-201ENST00000609089 5141 ntBASIC3.09□□□□□ -1.92
USP16Q9Y5T5 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.92
USP16Q9Y5T5 CUL1P1-201ENST00000509510 2425 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 RNU6-1249P-201ENST00000363237 111 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 RNU6-216P-201ENST00000363282 104 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 RNU6-657P-201ENST00000383904 107 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 SNORA26.7-201ENST00000391288 122 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 RNA5SP425-201ENST00000410336 112 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 RAD23BP2-201ENST00000416003 1207 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC106883.1-201ENST00000418805 562 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 HSPE1P1-201ENST00000421494 318 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 EEF1A1P39-201ENST00000440791 250 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 MTCO2P25-201ENST00000447065 681 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC008481.1-201ENST00000463278 396 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC092757.1-201ENST00000467293 467 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC126182.1-201ENST00000478134 357 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC009063.1-201ENST00000563342 702 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 MTND3P13-201ENST00000574391 343 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC091057.3-201ENST00000602684 733 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 XIAPP1-201ENST00000603162 600 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC128687.1-201ENST00000605304 619 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AP001521.1-201ENST00000609150 300 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AL359198.2-201ENST00000611836 194 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC022960.3-201ENST00000619794 441 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
USP16Q9Y5T5 MTCO1P23-201ENST00000415223 1526 ntBASIC3.08□□□□□ -1.92
USP16Q9Y5T5 AC006378.2-201ENST00000623178 2476 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 RNU6-878P-201ENST00000384578 110 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AL136310.1-201ENST00000404926 654 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 RPS3AP37-201ENST00000419176 745 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AL589880.1-201ENST00000448271 287 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 EXOSC3P1-201ENST00000448649 500 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 HMGB1P15-201ENST00000453854 435 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 snoU109.4-201ENST00000458953 143 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 UBE2V1P12-201ENST00000503954 474 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC113420.1-201ENST00000507903 571 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms