Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC008725.1-201ENST00000605123 2263 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 RNY3P3-201ENST00000363816 102 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 SNORA36C-201ENST00000384289 132 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 NDUFS5P1-201ENST00000405668 289 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-908P-201ENST00000410160 94 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU2-29P-201ENST00000410423 189 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-373P-201ENST00000411247 98 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU2-71P-201ENST00000411395 189 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 TOMM22P1-201ENST00000418578 312 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AL139413.1-201ENST00000421309 217 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC018630.2-202ENST00000422992 927 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 RPS15AP9-201ENST00000439856 381 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 GAPDHP27-201ENST00000447427 1020 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 MTND1P18-201ENST00000448191 573 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 MTND3P10-201ENST00000450967 341 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-953P-201ENST00000459154 107 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 MRPS17P3-201ENST00000465453 385 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AP000926.1-201ENST00000479573 241 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC105137.1-201ENST00000484355 562 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC108022.1-201ENST00000493466 478 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 NIPA2P2-201ENST00000496376 1083 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 SNORA31.9-201ENST00000516429 84 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-835P-201ENST00000516974 104 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 RN7SKP258-201ENST00000517151 304 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR4775-201ENST00000581168 75 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC104763.2-201ENST00000604179 382 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 uc_338.13-201ENST00000618243 179 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC079684.1-201ENST00000621405 437 ntBASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC006020.1-201ENST00000420179 1854 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 USP8P1-201ENST00000494673 3183 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC079780.1-201ENST00000428259 207 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 HMGB1P27-201ENST00000431429 603 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC020550.1-201ENST00000447385 163 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 VN1R34P-201ENST00000447387 883 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 DHFRP3-201ENST00000455595 559 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 PARP4P3-201ENST00000510265 317 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC074344.1-201ENST00000512823 224 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-358P-201ENST00000516564 75 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 RNA5SP503-201ENST00000517047 117 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC090151.1-201ENST00000520784 730 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 PHBP17-201ENST00000528576 541 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 CBX3P5-201ENST00000552017 521 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 MED28P6-201ENST00000558776 231 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR548S-201ENST00000581352 82 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC113403.1-201ENST00000604910 193 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AL020991.1-201ENST00000612314 373 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC004825.2-201ENST00000616634 455 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AL589994.2-201ENST00000621124 579 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR4727-201ENST00000622232 55 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AC093648.1-201ENST00000623546 606 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR492-201ENST00000638676 116 ntBASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA3Q9Y5H0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms