Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU1-146P-201ENST00000364015 165 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 MIR548I2-201ENST00000408348 149 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 RNA5SP494-201ENST00000410653 129 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AL133482.1-201ENST00000415988 498 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 RPL12P46-201ENST00000436610 195 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AL390119.1-201ENST00000440329 312 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AL513124.1-201ENST00000450410 614 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AL136097.1-201ENST00000456945 913 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC087588.1-201ENST00000462203 316 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC087190.1-201ENST00000484462 480 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC107032.1-201ENST00000485945 480 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC008694.2-201ENST00000517591 306 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC022868.1-201ENST00000517767 391 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AL157871.3-201ENST00000557231 293 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 MIR4311-201ENST00000580794 100 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 MIR8076-201ENST00000611401 83 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC004852.3-201ENST00000614131 326 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 MIR7155-201ENST00000615925 56 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 U73479.1-201ENST00000618062 168 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 AC005332.5-201ENST00000591222 2919 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 HSPA8P1-201ENST00000425843 1833 ntBASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 Y_RNA.269-201ENST00000364685 89 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 Y_RNA.277-201ENST00000364754 102 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 RNA5SP131-201ENST00000365452 119 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-395P-201ENST00000365662 106 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-187P-201ENST00000384139 106 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 MIR301A-201ENST00000385261 86 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC087650.1-201ENST00000431445 468 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 RPL26P6-201ENST00000440913 438 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 RN7SL172P-201ENST00000460535 303 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 RN7SL197P-201ENST00000466981 299 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 SNRPCP3-201ENST00000474888 476 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-1338P-201ENST00000516328 91 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC137627.1-201ENST00000545761 289 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 MIR4300-201ENST00000581016 96 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC098826.3-201ENST00000603823 466 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC006077.1-201ENST00000604746 343 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AC107294.1-201ENST00000609524 467 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 RPSAP73-201ENST00000614820 330 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 MIR376A1-201ENST00000616574 68 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 PABPC1P6-201ENST00000445594 1829 ntBASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB11Q9Y5F2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 AC007685.1-201ENST00000329806 452 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-545P-201ENST00000362681 104 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-1266P-201ENST00000362794 105 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 RNA5SP507-201ENST00000363603 121 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 U3.13-201ENST00000364804 214 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-171P-201ENST00000384354 107 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 RNU6-837P-201ENST00000391056 108 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 DPPA2P3-201ENST00000411853 655 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 AL133173.1-201ENST00000423458 397 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 MTATP6P4-201ENST00000427725 675 ntBASIC5.44□□□□□ -1.54
PCDHB11Q9Y5F2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms