Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC005336.3-201ENST00000623833 2679 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 RNU1-105P-201ENST00000363470 161 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 MIR144-201ENST00000384886 86 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 RNA5SP354-201ENST00000391247 136 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 TMSB4XP8-201ENST00000402089 135 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 MIR1290-201ENST00000408735 78 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 TMSB4XP6-201ENST00000415187 135 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AL158050.1-201ENST00000416077 457 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 TMSB4XP1-201ENST00000424567 135 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 RPL7L1P10-201ENST00000427790 463 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC236972.1-201ENST00000433225 199 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 RBM43P1-201ENST00000476891 1081 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC135721.1-201ENST00000497954 479 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC087241.2-201ENST00000535801 324 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC007115.1-201ENST00000546853 234 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 ISCA1P3-201ENST00000577104 373 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 UCA1.1-201ENST00000620952 75 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 AL512506.2-201ENST00000624472 458 ntBASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.07□□□□□ -2.08
HDGFL3Q9Y3E1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 OR5T3-201ENST00000303059 1023 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 RNU6-878P-201ENST00000384578 110 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 RPS4XP7-201ENST00000406274 780 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 RNU2-47P-201ENST00000410649 186 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 RNU4-27P-201ENST00000410889 139 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 BEND7P1-201ENST00000422058 457 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AC246680.2-201ENST00000422106 389 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 MTCO1P48-201ENST00000448024 1096 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AC087588.1-201ENST00000462203 316 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 UBE2DNL-203ENST00000474922 222 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AC114322.1-201ENST00000506771 926 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AC017037.2-201ENST00000513850 890 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 RNU6-928P-201ENST00000516876 104 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 HMGB1P1-201ENST00000522557 636 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 GLYCAM1-201ENST00000546596 285 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 CR383656.7-201ENST00000548164 174 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 RN7SL622P-201ENST00000585292 275 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 DNAJC19P3-201ENST00000594491 331 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 OR4H6P-202ENST00000603819 340 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AC004852.3-201ENST00000614131 326 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 AC090132.2-201ENST00000615881 347 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 ZNF849P-201ENST00000594711 1566 ntBASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.06□□□□□ -2.08
HDGFL3Q9Y3E1 RNU4-82P-201ENST00000362443 140 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 RNU6-461P-201ENST00000364195 107 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 SNORA68.1-201ENST00000364537 132 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 RNU1-51P-201ENST00000365345 176 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AL591416.1-201ENST00000404015 867 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 RNU2-43P-201ENST00000410306 190 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AL512637.2-201ENST00000431287 1256 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AC009296.1-201ENST00000443146 155 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 MTCYBP3-201ENST00000445588 1137 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AL592447.1-201ENST00000447592 540 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AL096803.2-201ENST00000450032 677 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 RNU7-23P-201ENST00000459465 62 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 RNU7-140P-201ENST00000459546 60 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 RPS15AP34-201ENST00000487776 387 ntBASIC2.05□□□□□ -2.08
HDGFL3Q9Y3E1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms