Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 RNA5SP322-201ENST00000363617 119 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 RNU6-853P-201ENST00000364306 107 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 RNU6-1074P-201ENST00000383995 104 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 Y_RNA.619-201ENST00000410951 90 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 MTCO1P21-201ENST00000416634 589 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 DUTP6-201ENST00000425573 462 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 USP9YP28-201ENST00000435142 589 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 RPL22P17-201ENST00000438729 315 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 Z82190.1-201ENST00000454534 490 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC096751.1-202ENST00000502691 1067 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 RN7SKP209-201ENST00000516888 304 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 RNU6-1003P-201ENST00000517099 105 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC245505.1-201ENST00000556398 224 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC073648.5-201ENST00000603502 305 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC006566.1-201ENST00000608943 513 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AC131902.3-201ENST00000611767 581 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 AL589743.7-201ENST00000612637 233 ntBASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK11AQ9UQ88 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 RNU6-348P-201ENST00000384386 107 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 SNORA11.2-201ENST00000408318 127 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC017083.1-201ENST00000428093 483 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 FAM103A2P-201ENST00000444122 354 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC023424.2-201ENST00000493479 777 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC093663.1-201ENST00000497190 394 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 RNU6-579P-201ENST00000516879 102 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 MIR4528-201ENST00000577763 90 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC012669.1-201ENST00000603209 283 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC110741.2-201ENST00000605278 268 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC138749.5-201ENST00000611461 208 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC008250.2-201ENST00000615261 205 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AP001506.1-201ENST00000615444 211 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 AC116165.2-201ENST00000616705 206 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 CCT4P2-201ENST00000233836 1548 ntBASIC5.53□□□□□ -1.52
CDK11AQ9UQ88 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 RNA5SP295-201ENST00000362655 121 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 SNORA48.2-201ENST00000390926 124 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 SNORD115.1-201ENST00000391109 76 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 Y_RNA.608-201ENST00000410647 95 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 AF274854.1-201ENST00000413236 615 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 MTCO3P30-201ENST00000426425 670 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 AL356535.1-201ENST00000440335 398 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 ST13P14-201ENST00000474095 734 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 AC069499.1-201ENST00000489433 509 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 EIF1P4-201ENST00000572664 335 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 AC137800.2-201ENST00000574375 120 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 AC012493.2-201ENST00000595083 291 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 AC104010.1-201ENST00000616889 150 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 MAPK10-373ENST00000641983 6772 ntBASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CDK11AQ9UQ88 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 AL356274.2-201ENST00000624379 3752 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 AC010733.2-201ENST00000589496 5702 ntBASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK11AQ9UQ88 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms