Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SNORA11-201ENST00000408789 128 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 RPEP5-201ENST00000441137 268 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AC055855.1-201ENST00000489563 579 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AC110792.1-201ENST00000491826 472 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 RNU6-1332P-201ENST00000516666 104 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AL138889.2-201ENST00000603883 242 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AL391358.1-201ENST00000605342 190 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AC103710.2-201ENST00000609912 942 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AC100778.3-201ENST00000580060 1750 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 CCT8P1-201ENST00000413611 1657 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 Y_RNA.16-201ENST00000362421 102 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 Y_RNA.576-201ENST00000384781 102 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AC068287.1-201ENST00000430283 295 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AC016712.1-201ENST00000431088 378 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 PRDX3P3-201ENST00000447765 522 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 RPL36AP13-201ENST00000457490 317 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 RPL7P23-201ENST00000493874 747 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AC136624.4-201ENST00000573044 370 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 MIR5096-201ENST00000583713 70 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AL031666.3-201ENST00000609320 1006 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AC244100.1-202ENST00000621554 382 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AC010266.2-201ENST00000564741 3255 ntBASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDZRN3Q9UPQ7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
PDZRN3Q9UPQ7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDZRN3Q9UPQ7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDZRN3Q9UPQ7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
PDZRN3Q9UPQ7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.46□□□□□ -1.37
PDZRN3Q9UPQ7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.46□□□□□ -1.37
PDZRN3Q9UPQ7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDZRN3Q9UPQ7 THAP12P5-201ENST00000405864 2275 ntBASIC6.46□□□□□ -1.37
PDZRN3Q9UPQ7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 Y_RNA.343-201ENST00000365354 112 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 RN7SKP114-201ENST00000410327 279 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 RPL19P1-201ENST00000411635 428 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AL162725.1-201ENST00000435405 301 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AC112498.1-201ENST00000444401 332 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AC006967.1-201ENST00000467608 589 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 OR7H2P-201ENST00000513483 306 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 Y_RNA.713-201ENST00000517013 96 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AC209154.1-201ENST00000582156 337 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AC011477.5-201ENST00000586571 259 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 RPS29P30-201ENST00000600975 111 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AC108706.1-201ENST00000611053 297 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AC023509.5-201ENST00000617434 807 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 U6.114-201ENST00000636407 96 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 AL731532.2-201ENST00000623542 1953 ntBASIC6.46□□□□□ -1.38
PDZRN3Q9UPQ7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 HAUS6P2-201ENST00000433254 2404 ntBASIC6.45□□□□□ -1.38
PDZRN3Q9UPQ7 RNY3P13-201ENST00000365542 102 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms