Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 CEACAMP1-201ENST00000434624 1035 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 NDUFB4P8-201ENST00000435351 367 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 VN1R105P-201ENST00000486595 910 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 RNA5SP116-201ENST00000516132 98 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 RN7SL652P-201ENST00000577769 300 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 DNAJC19P2-201ENST00000593340 302 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 FKBP1AP1-201ENST00000594588 318 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 IMMP1LP3-201ENST00000604197 224 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 AL353796.1-201ENST00000561542 3241 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 AC114774.1-201ENST00000507410 1770 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 AC007685.1-201ENST00000329806 452 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 RN7SKP185-201ENST00000362813 326 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 RNU6-899P-201ENST00000363947 107 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 RNU6-275P-201ENST00000364910 107 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 RNU6-211P-201ENST00000384047 107 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 RNU6-14P-201ENST00000384630 106 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 RNU1-77P-201ENST00000390868 162 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 MTCO1P44-201ENST00000441935 243 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 AC010655.1-201ENST00000449336 292 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 RNU6-953P-201ENST00000459154 107 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 AC090616.3-201ENST00000582184 217 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 BPIFA4P-203ENST00000603168 689 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 AC073869.8-201ENST00000641806 335 ntBASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
TRIM35Q9UPQ4 AC015799.1-201ENST00000622996 3122 ntBASIC7.15□□□□□ -1.27
TRIM35Q9UPQ4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM35Q9UPQ4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM35Q9UPQ4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM35Q9UPQ4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM35Q9UPQ4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC7.15□□□□□ -1.27
TRIM35Q9UPQ4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM35Q9UPQ4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM35Q9UPQ4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.15□□□□□ -1.27
TRIM35Q9UPQ4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-512P-201ENST00000364438 103 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AC009804.1-201ENST00000400949 179 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AL133388.1-201ENST00000404509 287 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 RPS15AP40-201ENST00000419621 391 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 BX510359.3-201ENST00000422168 306 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 POLR2KP2-201ENST00000438155 177 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 GAPDHP25-201ENST00000447061 1001 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AC009237.7-201ENST00000447357 229 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 DDX10P1-201ENST00000448545 1933 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AC010733.1-201ENST00000451515 401 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AL133445.1-201ENST00000467051 452 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 ATP5F1P5-201ENST00000526403 760 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AP004607.2-201ENST00000533949 322 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 AC109583.2-201ENST00000617367 129 ntBASIC7.14□□□□□ -1.27
TRIM35Q9UPQ4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 U3.2-201ENST00000362981 210 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-263P-201ENST00000363811 107 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 RN7SKP17-201ENST00000411242 351 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 AL353621.1-201ENST00000418219 243 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 AL138785.1-201ENST00000425821 331 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 AC099670.2-201ENST00000435130 321 ntBASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM35Q9UPQ4 AC127537.2-201ENST00000439258 465 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms