Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RNU6-648P-201ENST00000410190 107 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 RPS3AP3-201ENST00000411933 242 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC005326.1-201ENST00000429197 123 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC005019.1-201ENST00000436455 431 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 MTND6P13-201ENST00000443510 523 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 RBMY2UP-201ENST00000453474 324 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 ANP32BP2-201ENST00000454525 545 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 snoU109.4-201ENST00000458953 143 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 snoU109.1-201ENST00000459339 135 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC138853.1-201ENST00000503549 823 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 SNORA31.20-201ENST00000517111 133 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AP003467.2-201ENST00000520175 319 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 LARP7P3-201ENST00000579888 337 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC006504.3-201ENST00000586818 523 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC012493.2-201ENST00000595083 291 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC004853.1-201ENST00000604902 698 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC011816.2-201ENST00000607089 556 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC109347.2-201ENST00000610220 349 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC013476.2-201ENST00000614456 459 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AP001506.1-201ENST00000615444 211 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AC040168.1-201ENST00000623594 991 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 CEP170P1-201ENST00000502249 4587 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 RNA5SP235-201ENST00000365411 114 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC104651.1-201ENST00000427559 735 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC098824.1-201ENST00000453565 980 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 snoU13.8-201ENST00000458890 104 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 HMGB1P25-201ENST00000468402 607 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC010285.1-201ENST00000470580 392 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 COX7A2P2-201ENST00000505291 250 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 RN7SKP298-201ENST00000515950 94 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 SNORA70.14-201ENST00000516205 110 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC008011.1-201ENST00000545989 227 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 EEF1B2P4-201ENST00000551398 348 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AL121603.1-201ENST00000553815 142 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 RPL21P5-201ENST00000554662 472 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 MIR3913-1-201ENST00000577744 102 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 UBE2L4-201ENST00000587688 464 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC090578.1-201ENST00000604955 591 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AL365503.1-201ENST00000605247 905 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC008250.2-201ENST00000615261 205 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AL158801.5-201ENST00000623123 465 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC095031.1-201ENST00000623685 672 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 AC027287.1-201ENST00000553115 1453 ntBASIC4.37□□□□□ -1.71
HDAC9Q9UKV0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 RNU6-359P-201ENST00000365466 108 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 Y_RNA.516-201ENST00000384541 124 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC078974.1-201ENST00000411597 223 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC099677.1-201ENST00000420575 175 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 COTL1P1-201ENST00000422309 375 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC087650.1-201ENST00000431445 468 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 DNAJC19P4-201ENST00000440115 345 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 HMGB3P22-202ENST00000451823 572 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 HMGN2P16-201ENST00000456802 261 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC008155.2-201ENST00000464337 397 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC025518.1-201ENST00000479856 347 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms