Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AL157777.2-201ENST00000258070 137 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 SNORD1C-201ENST00000363315 78 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 RNA5SP335-201ENST00000363817 110 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 RNU1-106P-201ENST00000384382 164 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 SNORD115-46-201ENST00000390982 71 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 MRPL35P1-201ENST00000404272 572 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 REREP1Y-201ENST00000422655 198 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AL590399.2-201ENST00000427536 309 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AL591043.1-201ENST00000432461 424 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 REREP2Y-201ENST00000439103 200 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AC098869.1-201ENST00000481627 292 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 MIR6810-201ENST00000622701 70 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AP002799.1-201ENST00000623552 423 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AC138965.3-201ENST00000623875 498 ntBASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.84□□□□□ -1.47
LIMD1Q9UGP4 DDX18P3-201ENST00000404856 2007 ntBASIC5.84□□□□□ -1.48
LIMD1Q9UGP4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AL137141.1-201ENST00000624622 4836 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC009643.2-201ENST00000603543 1448 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC239868.2-201ENST00000564237 4527 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 RNU6-384P-201ENST00000364900 104 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 RNA5SP30-201ENST00000365552 115 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 RNU6-746P-201ENST00000384112 109 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 RNA5SP36-201ENST00000410197 133 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AL117339.3-201ENST00000418733 162 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 MTCO1P39-201ENST00000426148 480 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 RPL23AP25-201ENST00000430973 463 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 PIGFP3-201ENST00000441918 722 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AL589765.3-201ENST00000446084 462 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC073850.1-201ENST00000449243 255 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 SNRPCP2-201ENST00000504370 475 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 MIR4480-201ENST00000582492 71 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC006116.3-201ENST00000592968 361 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC006557.5-201ENST00000603126 811 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AL645944.1-201ENST00000603857 493 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC091903.1-201ENST00000624322 454 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 LINC02555-201ENST00000563933 1951 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 NCAPGP1-201ENST00000505112 1814 ntBASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMD1Q9UGP4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms