Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 FRG1CP-201ENST00000358464 769 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 RNU6-1042P-201ENST00000384204 107 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 Y_RNA.608-201ENST00000410647 95 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AL137014.1-201ENST00000420490 1226 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AL121871.1-201ENST00000443413 436 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 USP9YP29-201ENST00000445112 563 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 HMGN2P21-201ENST00000447764 270 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AL033528.1-201ENST00000453780 140 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 Z82190.1-201ENST00000454534 490 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 BTF3P5-201ENST00000457252 467 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 MTCO1P42-201ENST00000457379 726 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 SNORD42A-201ENST00000459584 64 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC093663.1-201ENST00000497190 394 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC109464.2-201ENST00000510242 943 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC022447.1-201ENST00000515358 464 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC079089.3-201ENST00000603094 673 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AL031176.1-201ENST00000604554 466 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 YPEL5P2-201ENST00000605553 359 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC009902.3-201ENST00000606235 2172 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AL139286.2-201ENST00000606838 396 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC002550.2-201ENST00000621246 394 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AP003355.3-201ENST00000623465 114 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 AC098679.4-201ENST00000624241 654 ntBASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HDAC6Q9UBN7 RIOK3P1-201ENST00000418778 1528 ntBASIC3.9□□□□□ -1.78
HDAC6Q9UBN7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HDAC6Q9UBN7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 RNU6-263P-201ENST00000363811 107 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 RNU2-16P-201ENST00000410712 136 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 RNU4-78P-201ENST00000410940 126 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 MTCO3P41-201ENST00000414801 328 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC017079.2-201ENST00000416102 485 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 USP9YP13-201ENST00000417797 480 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC099677.1-201ENST00000420575 175 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AL356583.2-201ENST00000426536 280 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 MTND4LP10-201ENST00000435146 291 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC091862.1-201ENST00000438016 1100 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 TXNP1-201ENST00000441872 371 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC084357.1-201ENST00000473404 255 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 RPS29P2-201ENST00000479278 136 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 LARP1BP2-201ENST00000486594 519 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 RNU6-201P-201ENST00000517100 61 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 IGKV2-26-201ENST00000518305 343 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC012213.3-201ENST00000577199 777 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 MIR3682-201ENST00000581338 84 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 MIR548AB-201ENST00000584917 84 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AL451064.1-201ENST00000607718 471 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AP000254.1-201ENST00000609934 520 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AL590099.1-201ENST00000615276 138 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC009509.4-201ENST00000619202 509 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC005183.1-201ENST00000603687 1979 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 AC011460.1-201ENST00000636268 1834 ntBASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.9□□□□□ -1.79
HDAC6Q9UBN7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 RNU6-1249P-201ENST00000363237 111 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 SNORA38.1-201ENST00000364172 131 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 RNA5SP235-201ENST00000365411 114 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 AP002088.1-201ENST00000382740 395 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 OR5H15-201ENST00000383696 930 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 RN7SKP53-201ENST00000411337 315 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 MTCO3P12-201ENST00000416718 547 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 CCDC58P2-201ENST00000417131 366 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 AL158071.1-201ENST00000430315 461 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 MTND1P34-201ENST00000438556 671 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 ATP5C1P1-201ENST00000441945 895 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 AC104308.1-201ENST00000454621 333 ntBASIC3.89□□□□□ -1.79
HDAC6Q9UBN7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms