Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLCF1Q9UBD9 RNU6-343P-201ENST00000364709 104 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 SNORA51.4-201ENST00000364993 124 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC233728.2-201ENST00000425348 757 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC093151.1-201ENST00000427711 313 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 MTATP6P4-201ENST00000427725 675 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 MTCO2P20-201ENST00000437339 673 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 THAP5P1-201ENST00000439089 262 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 MTND3P1-201ENST00000441336 220 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 GAPDHP27-201ENST00000447427 1020 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AL592447.1-201ENST00000447592 540 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 MEMO1P3-201ENST00000459811 302 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 RN7SKP43-201ENST00000516173 320 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 RNU6-311P-201ENST00000516224 102 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 SNORA70.16-201ENST00000516390 95 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 RNU6-528P-201ENST00000516926 100 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 RNU6-714P-201ENST00000516963 103 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 MTND4P33-201ENST00000556706 766 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 AL353997.4-201ENST00000586196 166 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC078899.3-201ENST00000599065 212 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AL592221.1-201ENST00000605266 382 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 ATP1B3P1-201ENST00000605365 821 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC009570.1-201ENST00000609599 745 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AL078595.3-201ENST00000623815 1166 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.54□□□□□ -2
CLCF1Q9UBD9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.54□□□□□ -2
CLCF1Q9UBD9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLCF1Q9UBD9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLCF1Q9UBD9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC011477.1-204ENST00000623416 1325 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 RNU6-359P-201ENST00000365466 108 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 MIR493-201ENST00000385254 89 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 SAR1AP2-201ENST00000392696 594 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 FAT1P1-201ENST00000406588 507 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 SSR1P2-201ENST00000415208 787 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC087499.2-201ENST00000432861 149 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 RNA5SP310-201ENST00000459084 116 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC117522.3-201ENST00000507974 584 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 AL359273.1-201ENST00000510918 627 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC024589.1-201ENST00000512207 263 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 RNA5SP216-201ENST00000516111 123 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 MIR3921-201ENST00000577308 85 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC138761.3-201ENST00000579993 334 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 VN1R82P-201ENST00000601481 356 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC091057.2-201ENST00000602594 792 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC007349.4-201ENST00000608114 532 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 MIR6130-201ENST00000619419 109 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 AC006927.4-201ENST00000639187 543 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 AL365361.1-201ENST00000566942 3481 ntBASIC2.53□□□□□ -2
CLCF1Q9UBD9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.53□□□□□ -2
CLCF1Q9UBD9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLCF1Q9UBD9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2.01
CLCF1Q9UBD9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLCF1Q9UBD9 AC009487.2-201ENST00000420969 6821 ntBASIC2.52□□□□□ -2.01
CLCF1Q9UBD9 RNU6-97P-201ENST00000363387 104 ntBASIC2.52□□□□□ -2.01
CLCF1Q9UBD9 RPS3AP26-201ENST00000398259 784 ntBASIC2.52□□□□□ -2.01
CLCF1Q9UBD9 RPS3AP24-201ENST00000407896 734 ntBASIC2.52□□□□□ -2.01
CLCF1Q9UBD9 MIR1290-201ENST00000408735 78 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms