Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC099063.3-201ENST00000642066 185 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 SEC63P2-201ENST00000503863 1939 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 Y_RNA.493-201ENST00000384422 102 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 RPS4XP3-201ENST00000398541 413 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 RNU4-78P-201ENST00000410940 126 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC007182.2-201ENST00000489251 402 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 RPPH1-2P-201ENST00000516688 293 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AMZ2P1-203ENST00000565833 850 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC095057.3-201ENST00000567102 1157 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 KC877982.1-201ENST00000602313 470 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC021851.1-201ENST00000608537 1082 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC110079.1-202ENST00000635213 138 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 RNU6-1339P-201ENST00000363574 91 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 RNU4-52P-201ENST00000384209 138 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 RNU6-712P-201ENST00000410558 100 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 MTCO3P12-201ENST00000416718 547 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 MORF4L1P6-201ENST00000418771 268 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AL121882.1-201ENST00000422893 417 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 SRIP2-201ENST00000428470 166 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 SDR42E1P3-201ENST00000438345 502 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 RPL7P12-201ENST00000446719 750 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 MTND2P19-201ENST00000449129 1012 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC006390.1-201ENST00000508068 283 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 OR8K4P-201ENST00000534608 872 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC106791.2-201ENST00000604680 391 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 BNIP3P10-201ENST00000605360 577 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AL161629.2-201ENST00000615347 275 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC140725.3-201ENST00000616193 880 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC007275.1-201ENST00000621243 671 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC012150.2-201ENST00000621300 544 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 U6.107-201ENST00000637108 79 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC88CQ9P219 MTND4P35-201ENST00000604257 1375 ntBASIC1.86□□□□□ -2.11
CCDC88CQ9P219 AC026241.1-201ENST00000517873 2142 ntBASIC1.85□□□□□ -2.11
CCDC88CQ9P219 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 ZFAND6P1-201ENST00000434138 605 ntBASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AL645638.1-201ENST00000440519 361 ntBASIC1.85□□□□□ -2.11
CCDC88CQ9P219 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
CCDC88CQ9P219 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 MED28P6-201ENST00000558776 231 ntBASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AP001330.4-201ENST00000604350 154 ntBASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AC009570.1-201ENST00000609599 745 ntBASIC1.85□□□□□ -2.11
CCDC88CQ9P219 VN1R74P-201ENST00000613259 503 ntBASIC1.85□□□□□ -2.11
CCDC88CQ9P219 AC097372.4-201ENST00000625025 466 ntBASIC1.85□□□□□ -2.11
CCDC88CQ9P219 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC88CQ9P219 Y_RNA.140-201ENST00000363474 103 ntBASIC1.84□□□□□ -2.11
CCDC88CQ9P219 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 AL121871.1-201ENST00000443413 436 ntBASIC1.84□□□□□ -2.11
CCDC88CQ9P219 AC004022.1-201ENST00000447766 1066 ntBASIC1.84□□□□□ -2.11
CCDC88CQ9P219 MTND3P4-201ENST00000453537 303 ntBASIC1.84□□□□□ -2.11
CCDC88CQ9P219 OR9N1P-202ENST00000494289 481 ntBASIC1.84□□□□□ -2.11
CCDC88CQ9P219 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 PRELID3BP4-201ENST00000515476 571 ntBASIC1.84□□□□□ -2.11
CCDC88CQ9P219 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 FAM92A1P1-201ENST00000528023 890 ntBASIC1.84□□□□□ -2.11
CCDC88CQ9P219 AL731537.2-201ENST00000561565 951 ntBASIC1.84□□□□□ -2.11
CCDC88CQ9P219 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CCDC88CQ9P219 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.84□□□□□ -2.12
CCDC88CQ9P219 RNU6-730P-201ENST00000383954 104 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 MIR767-201ENST00000390228 109 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 RNU6-1197P-201ENST00000391183 107 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CCDC88CQ9P219 RNA5SP38-201ENST00000410750 119 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC233728.2-201ENST00000425348 757 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms