Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 AC064836.2-201ENST00000609491 462 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 Mico1.1-201ENST00000611698 204 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC007742.2-201ENST00000618226 398 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC243312.2-201ENST00000623340 601 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC110801.1-201ENST00000623590 212 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.96□□□□□ -1.77
VSX1Q9NZR4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
VSX1Q9NZR4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 RNU1-108P-201ENST00000362556 161 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 RNU4-66P-201ENST00000365199 138 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 RNU6-1013P-201ENST00000384180 107 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 Y_RNA.530-201ENST00000384587 101 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AL359634.1-202ENST00000404721 284 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 RNU2-43P-201ENST00000410306 190 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 RNU6-712P-201ENST00000410558 100 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 RN7SKP106-201ENST00000410832 272 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AL645937.1-202ENST00000421799 937 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC011753.3-201ENST00000443436 406 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AL162591.2-201ENST00000449634 317 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC010326.1-201ENST00000462726 602 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 TRBV1-201ENST00000476502 284 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 FTH1P9-201ENST00000513251 355 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC015795.1-201ENST00000513669 327 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 IGKV2D-23-201ENST00000518179 286 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AL137161.1-201ENST00000532231 390 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC007448.1-201ENST00000582714 234 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 MIR4795-201ENST00000584182 89 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AL160290.3-201ENST00000604869 165 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 Z98200.1-201ENST00000607298 470 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 MIR6891-201ENST00000618788 93 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 MIR7703-201ENST00000620784 77 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC007998.5-201ENST00000622938 237 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC011155.2-201ENST00000623202 216 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC090617.10-201ENST00000624308 134 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 TPTEP1-208ENST00000636884 213 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 AC099654.10-201ENST00000640395 161 ntBASIC3.96□□□□□ -1.78
VSX1Q9NZR4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.96□□□□□ -1.78
VSX1Q9NZR4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 MFSD8-242ENST00000641690 4199 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 AL365440.1-201ENST00000436135 2167 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 API5P2-201ENST00000397055 1498 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 SNORD113.2-201ENST00000364166 89 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 SNORD115-7-201ENST00000365306 82 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 RNU6-61P-201ENST00000365528 109 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 SNORA70F-201ENST00000384142 135 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 RPS4XP9-201ENST00000405151 780 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 FAT1P1-201ENST00000406588 507 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 RNA5SP104-201ENST00000410989 118 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 RPL7P10-201ENST00000417407 739 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 RNU7-180P-201ENST00000459240 63 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 RNU6-329P-201ENST00000459618 107 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 RN7SL610P-201ENST00000463845 291 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 RPL12P20-201ENST00000475538 479 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 AC083982.1-201ENST00000485679 344 ntBASIC3.95□□□□□ -1.78
VSX1Q9NZR4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.95□□□□□ -1.78
VSX1Q9NZR4 AC092436.1-201ENST00000506450 503 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms