Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC034268.2-201ENST00000571784 482 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AP003355.3-201ENST00000623465 114 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 SEPT14P19-203ENST00000633205 211 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC092125.1-201ENST00000562568 1995 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 RPL7P26-201ENST00000333817 754 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 RNY4P24-201ENST00000362735 96 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 U8.3-201ENST00000363321 132 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 Y_RNA.234-201ENST00000364409 97 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AL359837.1-201ENST00000381357 287 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 RNU5A-6P-201ENST00000384136 116 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 SNORD115.1-201ENST00000391109 76 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 U3.29-201ENST00000391296 212 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 FCF1P10-201ENST00000407590 479 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC078974.1-201ENST00000411597 223 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC093578.1-201ENST00000415219 368 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 SPA17P1-201ENST00000416656 452 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 C1DP2-201ENST00000418167 426 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 ZNF734P-201ENST00000419494 1534 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AL589872.1-201ENST00000426602 288 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC073614.1-201ENST00000438690 650 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 DNAJC19P4-201ENST00000440115 345 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 RPL17P49-201ENST00000443728 411 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 U3.44-201ENST00000458938 192 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 RPS4XP10-201ENST00000465034 731 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC006390.1-201ENST00000508068 283 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 RNU2-46P-201ENST00000517038 113 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 RNU6-430P-201ENST00000517078 107 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AP003467.2-201ENST00000520175 319 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 MED28P5-201ENST00000528254 438 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 OR8L1P-201ENST00000534005 955 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC005476.1-201ENST00000554427 397 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC037471.2-201ENST00000564941 598 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC126118.1-201ENST00000607744 628 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AF250324.2-201ENST00000608299 610 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AC138649.3-201ENST00000622154 254 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 AL645937.1-201ENST00000641739 1652 ntBASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCAL1Q9NZC9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 ZNF285B-201ENST00000561698 1767 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 SAGE4P-201ENST00000442271 3381 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RNA5SP124-201ENST00000362739 110 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RNU6-339P-201ENST00000384310 107 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RPL7P25-201ENST00000404151 721 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 CCNG1P1-201ENST00000406783 885 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 RNA5SP293-201ENST00000410527 113 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC009961.2-201ENST00000435771 251 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 MTATP6P13-201ENST00000438531 667 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 MTND1P1-201ENST00000445453 368 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AL359073.1-201ENST00000448036 403 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 AC093392.2-201ENST00000450682 337 ntBASIC3.56□□□□□ -1.84
SMARCAL1Q9NZC9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms