Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL031679.1-201ENST00000400616 525 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC068533.2-201ENST00000411872 306 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC236972.1-201ENST00000433225 199 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 MTND4P6-201ENST00000438297 472 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AP000949.1-201ENST00000438328 629 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 UBE2DNL-203ENST00000474922 222 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC026801.2-201ENST00000515352 425 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 RNU6-583P-201ENST00000516012 92 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 RNU6-528P-201ENST00000516926 100 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC090888.1-201ENST00000561335 1141 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AL022067.1-201ENST00000602426 454 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC015871.2-201ENST00000603605 948 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC013553.2-201ENST00000604244 589 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AL033523.1-201ENST00000605153 153 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC024060.1-201ENST00000607052 494 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 RNU6-1122P-201ENST00000384449 107 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 TPMTP2-201ENST00000414372 726 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AL139421.1-201ENST00000423010 169 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AC009414.1-201ENST00000427200 443 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AC092427.1-202ENST00000430569 476 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 RPS20P5-201ENST00000434808 360 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AC107083.1-201ENST00000439643 279 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 RPL18AP17-201ENST00000455326 198 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 RN7SL499P-201ENST00000481141 276 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AC103975.1-201ENST00000482506 483 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 MTCYBP17-201ENST00000503579 789 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 SUMO2P5-201ENST00000506790 245 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 SNORA9.3-201ENST00000516383 129 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 HPRT1P3-201ENST00000539521 576 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AC112220.2-201ENST00000605513 533 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AL590099.1-201ENST00000615276 138 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 AC007998.5-201ENST00000622938 237 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 OR5H6-203ENST00000642105 978 ntBASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
KLHL28Q9NXS3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 SDAD1P2-201ENST00000441308 2028 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 RNU4-51P-201ENST00000364206 140 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 Y_RNA.408-201ENST00000383987 102 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 MIR767-201ENST00000390228 109 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 Z75741.2-201ENST00000417272 1167 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 PPP1R11P2-201ENST00000423543 382 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AL590383.1-201ENST00000428602 75 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AL135752.1-201ENST00000479477 471 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC083906.5-201ENST00000503722 328 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC093752.1-206ENST00000511823 336 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 RNU6-928P-201ENST00000516876 104 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 LRRC6P1-201ENST00000532188 885 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC104072.1-201ENST00000568817 668 ntBASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.66□□□□□ -1.98
KLHL28Q9NXS3 AC011451.2-201ENST00000604303 598 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms