Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC091144.1-201ENST00000519573 138 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 DEFB108D-201ENST00000527787 222 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AC243829.7-201ENST00000633081 225 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AC000374.1-201ENST00000434698 1745 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-858P-201ENST00000362436 107 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 ADAM24P-201ENST00000398655 2101 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AC092447.6-201ENST00000414578 210 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AC092423.1-201ENST00000430165 186 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 snoU13.3-201ENST00000459441 104 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 RPS23P2-201ENST00000463671 415 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AL133445.1-201ENST00000467051 452 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AC007686.1-201ENST00000488511 463 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AC074255.1-201ENST00000511259 501 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AC007016.1-201ENST00000512110 244 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 ERHP1-201ENST00000523006 310 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AC104576.1-201ENST00000524225 88 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 CR383656.7-201ENST00000548164 174 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 MIR5701-3-201ENST00000578890 82 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 MIR4505-201ENST00000582238 73 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 MIR5701-1-201ENST00000585138 82 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AC060780.2-201ENST00000589047 198 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AC012119.1-201ENST00000603184 222 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 MIR5701-2-201ENST00000615634 82 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AL365265.1-201ENST00000621045 234 ntBASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CUEDC1Q9NWM3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AL031595.2-201ENST00000624215 19071 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-1020P-201ENST00000363684 107 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-1279P-201ENST00000383917 103 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 Y_RNA.439-201ENST00000384119 94 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 Y_RNA.581-201ENST00000391017 97 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AL139039.1-201ENST00000401900 692 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AL591034.2-201ENST00000402839 359 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 EI24P4-201ENST00000423683 1078 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 PTMAP6-201ENST00000439110 327 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AC234775.1-201ENST00000454247 670 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 RPL37P6-201ENST00000460682 294 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 RN7SL329P-201ENST00000467740 299 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AC022884.2-201ENST00000578535 580 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 MIR6748-201ENST00000610433 71 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 FP236240.3-201ENST00000623061 327 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AL391684.1-202ENST00000641293 1636 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 SRRM1P3-201ENST00000426911 2678 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 AC009643.2-201ENST00000603543 1448 ntBASIC5.48□□□□□ -1.53
CUEDC1Q9NWM3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms