Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AC108467.2-201ENST00000617640 1597 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 CBX3P1-201ENST00000325243 554 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 DEFB108F-201ENST00000344638 222 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 RNA5SP307-201ENST00000362863 116 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 Y_RNA.86-201ENST00000363020 111 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 MIR23B-201ENST00000384832 97 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 SOD2P1-201ENST00000396543 562 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 RNA5SP39-201ENST00000411245 120 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC114491.1-201ENST00000416095 246 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 RPL36AP53-201ENST00000432891 316 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 NEFMP1-201ENST00000443423 1006 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 RPS5P7-201ENST00000456664 608 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AL162395.1-201ENST00000457882 422 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC092436.1-201ENST00000506450 503 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 RN7SKP258-201ENST00000517151 304 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AP005435.4-201ENST00000529514 284 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 RANP3-201ENST00000530970 276 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC067852.3-201ENST00000589177 561 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC010525.2-201ENST00000590920 195 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC174048.1-201ENST00000603389 144 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC020634.1-201ENST00000608701 549 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC010338.1-201ENST00000621823 717 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC011155.2-201ENST00000623202 216 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AL354685.2-201ENST00000448218 1447 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 AC103710.2-202ENST00000641454 2853 ntBASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCM2LQ9NUG4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 ASNSP3-201ENST00000451989 1306 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 Y_RNA.279-201ENST00000364763 95 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 SNORD115-7-201ENST00000365306 82 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 RNU6-190P-201ENST00000384154 102 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 MIR607-201ENST00000385241 96 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 RNU6-903P-201ENST00000391270 109 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AL606923.1-201ENST00000406616 190 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 RNU4-46P-201ENST00000410818 138 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 NRBF2P3-201ENST00000432731 865 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AL121877.1-201ENST00000453704 622 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AURKAPS2-201ENST00000454983 333 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 SCARNA10-201ENST00000459255 330 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AP000873.1-201ENST00000463987 400 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 RPL23AP11-201ENST00000475260 469 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AC092451.1-201ENST00000480211 153 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AC114781.4-201ENST00000513707 639 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 RNU6-677P-201ENST00000516914 101 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 RNU6-1073P-201ENST00000517182 106 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 SUMO2P20-201ENST00000520803 283 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AP006587.4-201ENST00000526053 529 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 OR5B19P-201ENST00000531766 928 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 OR5B10P-201ENST00000532869 642 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 RPL23AP97-201ENST00000568955 471 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AC005951.2-201ENST00000576282 495 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AL356218.2-201ENST00000605264 187 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 MIR6853-201ENST00000619642 74 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 MIR4727-201ENST00000622232 55 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 AC016588.2-201ENST00000632484 3021 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 MTND4P14-201ENST00000435799 1354 ntBASIC4.25□□□□□ -1.73
CCM2LQ9NUG4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms