Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AC008751.2-201ENST00000597885 980 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 YPEL5P2-201ENST00000605553 359 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AP002826.1-201ENST00000608835 315 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AL450472.3-201ENST00000615578 367 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 PLCE1P1-201ENST00000622094 305 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 AP003485.2-201ENST00000623636 610 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 PCMTD1P7-201ENST00000634506 357 ntBASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SMC4Q9NTJ3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SMC4Q9NTJ3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 Y_RNA.18-201ENST00000362461 102 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 RNU6-1078P-201ENST00000364522 103 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 SNORD15B-201ENST00000384714 146 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 RPS3AP26-201ENST00000398259 784 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC012498.1-201ENST00000424037 437 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 RPL23AP69-201ENST00000431134 458 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 RPL26P6-201ENST00000440913 438 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 SSXP4-201ENST00000451349 245 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 RPS23P3-201ENST00000470993 430 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC006445.1-201ENST00000491925 405 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC114967.1-201ENST00000504890 259 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 SNORA70.24-201ENST00000517233 118 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 FAM60DP-201ENST00000524174 632 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 OR4H12P-201ENST00000556269 907 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC105224.1-201ENST00000587055 421 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC006539.2-201ENST00000601729 572 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AP000811.1-201ENST00000603803 651 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC018714.1-201ENST00000605028 208 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC091304.6-201ENST00000619761 202 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC009268.2-201ENST00000621925 457 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AL356596.1-201ENST00000624230 379 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC079597.1-201ENST00000624306 508 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC097655.1-201ENST00000635075 318 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 MAPK10-362ENST00000641864 4484 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC009902.3-201ENST00000606235 2172 ntBASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SMC4Q9NTJ3 AC005832.2-201ENST00000538921 1430 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 RNU6-76P-201ENST00000384060 104 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 RNU5A-2P-201ENST00000384337 116 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 RNU6-253P-201ENST00000384730 105 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 MIR483-201ENST00000385070 76 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 U3.20-201ENST00000390909 217 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 MIR1290-201ENST00000408735 78 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 U3.42-201ENST00000408746 214 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 HMGB3P23-201ENST00000414981 585 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 RPL23AP39-201ENST00000415533 405 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 UBE2V1P13-201ENST00000436983 439 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 LSM1P1-201ENST00000438629 273 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AL117351.1-201ENST00000438864 766 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 THAP5P1-201ENST00000439089 262 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AC098826.2-201ENST00000452011 651 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 ARPC3P2-201ENST00000457786 533 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 RPS27AP1-201ENST00000475545 471 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 CBX3P3-201ENST00000508108 532 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 MTND5P4-201ENST00000514978 288 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 SNORA70.16-201ENST00000516390 95 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 RNA5SP380-201ENST00000517190 98 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 ELOCP32-201ENST00000548625 324 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AC145350.1-201ENST00000567426 208 ntBASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.95□□□□□ -1.78
SMC4Q9NTJ3 AC106900.2-201ENST00000604994 317 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms