Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL391813.1-201ENST00000603098 260 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC005034.5-201ENST00000604219 466 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AL021997.1-201ENST00000605757 193 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 MIR6749-201ENST00000617008 69 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC008443.7-201ENST00000622195 246 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC244517.12-201ENST00000623581 663 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AP003400.5-201ENST00000624827 617 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC010889.1-201ENST00000566193 2666 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-1066P-201ENST00000363573 105 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 RPS3AP23-201ENST00000401762 784 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 RPL21P65-201ENST00000406094 466 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 ATP5A1P2-201ENST00000412323 255 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 RPS20P15-201ENST00000412792 311 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 RPL17P12-201ENST00000413391 526 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AL355433.1-201ENST00000422804 300 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC008850.1-201ENST00000427546 362 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC005300.1-201ENST00000428401 373 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 RPL30P4-201ENST00000429309 333 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AL353689.1-201ENST00000438895 199 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC093155.1-201ENST00000440164 826 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 CBX1P1-201ENST00000440184 427 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC011816.1-201ENST00000441346 546 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 RPL7P55-201ENST00000450522 746 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC023141.9-201ENST00000458734 412 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 SETP6-201ENST00000479329 568 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC112518.2-201ENST00000508565 425 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 CDH12P4-201ENST00000517835 295 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 CDH12P3-201ENST00000517935 295 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 CDH12P1-201ENST00000518435 295 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 DUXAP2-201ENST00000519198 589 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 PSMA2P1-201ENST00000526365 646 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 TOMM20P1-201ENST00000534518 427 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC006518.2-201ENST00000542513 940 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC106782.4-201ENST00000568264 210 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 MIR4789-201ENST00000577469 82 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 MIR4299-201ENST00000577899 72 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 MIR4529-201ENST00000578110 78 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 SNORD95-201ENST00000579879 68 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC100793.4-201ENST00000613683 429 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC020658.4-201ENST00000613987 684 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC010678.1-201ENST00000614118 713 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC013476.2-201ENST00000614456 459 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC253576.2-201ENST00000618815 580 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC002550.2-201ENST00000621246 394 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 MIR6807-201ENST00000621968 92 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 AC025048.6-202ENST00000627667 438 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 MIR7157-201ENST00000635801 60 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 ELF2P3-201ENST00000445099 1506 ntBASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC42SE1Q9NRR8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC126755.2-208ENST00000327792 462 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AC138969.1-213ENST00000331436 462 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 MIR22-201ENST00000362190 85 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RN7SKP171-201ENST00000364417 303 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RNU4-42P-201ENST00000364738 142 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-213P-201ENST00000384051 104 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 U3.25-201ENST00000391209 220 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RN7SKP273-201ENST00000411392 314 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AL357078.2-201ENST00000416486 427 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 IFNA20P-201ENST00000436840 528 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RPL36AP15-201ENST00000444514 266 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RPL39P6-201ENST00000448289 150 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 MTND2P24-201ENST00000453434 806 ntBASIC1.18□□□□□ -2.22
CDC42SE1Q9NRR8 RPL23AP3-201ENST00000453844 468 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms