Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.146-201ENST00000363549 102 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 RNU6-641P-201ENST00000384006 107 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.445-201ENST00000384168 102 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 RNU6-1304P-201ENST00000411374 106 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 VDAC1P9-201ENST00000412766 841 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC018630.2-202ENST00000422992 927 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 RPL7L1P10-201ENST00000427790 463 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 MED13P1-201ENST00000428342 171 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 HMGB3P11-201ENST00000440127 604 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.635-201ENST00000459041 101 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC012181.1-201ENST00000479895 423 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC116562.3-201ENST00000506136 177 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 RNU6-513P-201ENST00000516104 104 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 RNA5SP49-201ENST00000516450 115 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 HMGB1P41-201ENST00000520234 440 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC068587.5-201ENST00000528506 175 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 COX6CP3-201ENST00000580869 223 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC106900.2-201ENST00000604994 317 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC010680.4-201ENST00000605334 543 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 CTHRC1P1-201ENST00000605383 469 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC099669.2-201ENST00000616549 437 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AL138713.1-201ENST00000624026 2130 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 AC006971.1-201ENST00000407916 4486 ntBASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM7Q9NR12 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 SNORA63.1-201ENST00000362493 131 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 RNU6-525P-201ENST00000363685 104 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 RNU6-356P-201ENST00000384140 107 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 RNY4P36-201ENST00000391116 96 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AL161631.1-201ENST00000417933 486 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AL445584.1-201ENST00000431451 330 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 PRPS1P1-201ENST00000445305 876 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AL118520.1-201ENST00000450770 291 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AC106872.2-201ENST00000494303 480 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 HMGB3P15-201ENST00000507326 574 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AC016065.2-201ENST00000514530 444 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 RNU6-864P-201ENST00000516256 108 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 RNU6-1038P-201ENST00000516516 104 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AC090151.1-201ENST00000520784 730 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AP001804.3-201ENST00000525146 880 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 MIR4424-201ENST00000585257 86 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AL022099.1-201ENST00000604551 712 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 MTND5P16-201ENST00000460269 1703 ntBASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDLIM7Q9NR12 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC244517.1-201ENST00000606030 2086 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC008079.2-201ENST00000623543 20396 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 RLIMP1-201ENST00000339626 1680 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AP001350.1-201ENST00000601906 1524 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL139276.1-201ENST00000311910 1001 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 RN7SKP44-201ENST00000363602 316 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.339-201ENST00000365325 102 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.414-201ENST00000384011 101 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 RNU6-1029P-201ENST00000384109 107 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.530-201ENST00000384587 101 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC097374.1-203ENST00000400783 485 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms