Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 RNU6-27P-201ENST00000516146 107 ntBASIC3.8□□□□□ -1.8
DDX4Q9NQI0 RN7SKP244-201ENST00000516513 307 ntBASIC3.8□□□□□ -1.8
DDX4Q9NQI0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 AC012414.6-201ENST00000568241 401 ntBASIC3.8□□□□□ -1.8
DDX4Q9NQI0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 AC087752.4-201ENST00000605911 462 ntBASIC3.8□□□□□ -1.8
DDX4Q9NQI0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 AC122108.2-201ENST00000611946 526 ntBASIC3.8□□□□□ -1.8
DDX4Q9NQI0 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.8□□□□□ -1.8
DDX4Q9NQI0 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.8□□□□□ -1.8
DDX4Q9NQI0 AF117829.1-206ENST00000621883 3802 ntBASIC3.8□□□□□ -1.8
DDX4Q9NQI0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 CRYM-AS1-204ENST00000637983 556 ntBASIC3.8□□□□□ -1.8
DDX4Q9NQI0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DDX4Q9NQI0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 SNORA80A-201ENST00000363922 136 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 Y_RNA.194-201ENST00000363985 102 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 RNU6-335P-201ENST00000364563 113 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 RNU6-359P-201ENST00000365466 108 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AL356421.1-201ENST00000403255 413 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 RNU2-71P-201ENST00000411395 189 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AIMP1P1-201ENST00000418670 937 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 VDAC1P3-201ENST00000434069 851 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AL353706.1-201ENST00000436728 494 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AL592447.1-201ENST00000447592 540 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AL445669.2-201ENST00000454425 421 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 snoU13.3-201ENST00000459441 104 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AC023424.2-201ENST00000493479 777 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 COX7A2P2-201ENST00000505291 250 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 HMGB3P15-201ENST00000507326 574 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 TPMTP1-201ENST00000592307 737 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AL365503.1-201ENST00000605247 905 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 BCRP9-201ENST00000605312 388 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 uc_338.25-201ENST00000613756 156 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 AL049780.3-201ENST00000624612 1583 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.79□□□□□ -1.8
DDX4Q9NQI0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX4Q9NQI0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 Y_RNA.234-201ENST00000364409 97 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 U3.26-201ENST00000391236 204 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AL138885.1-201ENST00000405921 675 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 RPL21P32-201ENST00000419877 477 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 SSXP1-201ENST00000453640 473 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 ST13P14-201ENST00000474095 734 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AC021205.2-201ENST00000480069 347 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 HMGB1P36-201ENST00000487709 576 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 CBX3P3-201ENST00000508108 532 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 PCBP2P3-201ENST00000509726 843 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 FABP5P5-201ENST00000515537 406 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 LARP7P3-201ENST00000579888 337 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AC239868.4-201ENST00000608318 671 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AC040168.1-201ENST00000623594 991 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AC092656.1-203ENST00000624134 423 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 AC091925.2-201ENST00000625059 256 ntBASIC3.78□□□□□ -1.8
DDX4Q9NQI0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms