Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RNA5SP354-201ENST00000391247 136 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AL513475.1-201ENST00000406602 315 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 RNU2-72P-201ENST00000411175 163 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AC099548.1-201ENST00000421443 426 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 RPL7P44-201ENST00000424827 742 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 RSL24D1P3-201ENST00000449255 495 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 RPL31P41-201ENST00000477967 372 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AC126182.1-201ENST00000478134 357 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AC008716.1-201ENST00000511084 513 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 RN7SKP31-201ENST00000516354 278 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 NDUFS5P6-201ENST00000529136 295 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AL132857.1-201ENST00000555180 708 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AC069545.1-201ENST00000605671 358 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AL390208.1-201ENST00000605885 644 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AC107308.1-201ENST00000615897 301 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 CDR1-202ENST00000625883 1485 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AL356473.1-201ENST00000406203 1408 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 AC007785.2-201ENST00000598627 1916 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 SNORA63.3-201ENST00000362682 132 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 Y_RNA.548-201ENST00000384656 105 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 SNORA11.1-201ENST00000408133 129 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 MTCO2P5-201ENST00000422621 426 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC013262.1-201ENST00000426710 252 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 RPS12P2-201ENST00000439728 269 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC092155.2-201ENST00000454675 477 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 snoU13.22-201ENST00000459428 104 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 RPL23AP70-201ENST00000483361 460 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AL049874.1-201ENST00000489560 388 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC010374.2-201ENST00000512933 535 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC074050.1-201ENST00000563247 211 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC090615.1-201ENST00000577519 154 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC090616.3-201ENST00000582184 217 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 VN1R78P-201ENST00000597393 564 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 RPL12P50-201ENST00000603116 116 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC245517.5-201ENST00000611529 162 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC023158.2-201ENST00000614876 543 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC034102.8-201ENST00000615146 484 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AL590099.1-201ENST00000615276 138 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 UCA1.1-201ENST00000620952 75 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC002550.2-201ENST00000621246 394 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 OR4G2P-202ENST00000641004 1759 ntBASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.5□□□□□ -2.01
CCNB1IP1Q9NPC3 AC022336.2-201ENST00000568966 2538 ntBASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 ZNF271P-202ENST00000465539 1970 ntBASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 RNU2-42P-201ENST00000410697 113 ntBASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 USP9YP21-201ENST00000420603 432 ntBASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 USP9YP22-201ENST00000438971 294 ntBASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 MTND4LP3-201ENST00000468320 276 ntBASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 RPS15AP34-201ENST00000487776 387 ntBASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 NAMPTP2-201ENST00000505629 1115 ntBASIC2.49□□□□□ -2.01
CCNB1IP1Q9NPC3 CDC42P4-201ENST00000510507 563 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms