Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MKKS-204ENST00000639674 192 ntBASIC2.28□□□□□ -2.04
VCX3AQ9NNX9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 HSPE1P11-201ENST00000339579 310 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 Y_RNA.25-201ENST00000362528 102 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 U3.40-201ENST00000408706 208 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 RNU2-40P-201ENST00000410833 196 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 RNA5SP21-201ENST00000410917 96 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 UBE2D3P3-201ENST00000426992 425 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 SEPT7P5-201ENST00000434048 306 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 AC092427.1-201ENST00000439177 601 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 AL049734.2-201ENST00000441066 616 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 MTCYBP11-201ENST00000447254 1109 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 RNU7-26P-201ENST00000458980 63 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 SCARNA17.1-201ENST00000516211 143 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 SCARNA17.2-201ENST00000516334 143 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 HSPE1P3-201ENST00000559254 309 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 MIR4637-201ENST00000582405 84 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 AC005776.1-201ENST00000603164 290 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 AL583856.2-201ENST00000606298 543 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 SCARNA17.4-201ENST00000614296 143 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 AC078880.5-201ENST00000617845 421 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 MIR6130-201ENST00000619419 109 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 MIR1322-201ENST00000638013 71 ntBASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VCX3AQ9NNX9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 RNU6-707P-201ENST00000364647 95 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 RNU6-468P-201ENST00000384003 109 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 SNORA6-201ENST00000384033 151 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 SNORD65.1-201ENST00000390889 71 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 HMGB1P17-201ENST00000403495 628 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 MIR1193-201ENST00000408109 78 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 FAM204CP-201ENST00000424489 642 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 RPL7P44-201ENST00000424827 742 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AC092047.1-201ENST00000424997 240 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 MTND2P24-201ENST00000453434 806 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AP1S2P1-201ENST00000457344 379 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AC138853.1-201ENST00000503549 823 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AC022447.3-201ENST00000506865 495 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 RNU6-528P-201ENST00000516926 100 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AC087465.1-201ENST00000560574 245 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 MIR4448-201ENST00000584360 86 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AL590099.1-201ENST00000615276 138 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AL596245.1-201ENST00000618994 362 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 U4.3-201ENST00000621047 82 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AL157770.1-201ENST00000623049 439 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 AC087821.2-201ENST00000637086 450 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 CCT4P2-201ENST00000233836 1548 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 ZNF658B-202ENST00000615961 3375 ntBASIC2.26□□□□□ -2.05
VCX3AQ9NNX9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AL109809.4-201ENST00000603520 2185 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 MIR21-201ENST00000362134 72 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 RNU6-217P-201ENST00000384164 104 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 MIR323B-201ENST00000385269 82 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 RPS7P9-201ENST00000414704 586 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 MTCO3P30-201ENST00000426425 670 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC092634.2-201ENST00000428146 1010 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AL133547.1-201ENST00000448546 220 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC244505.3-201ENST00000454598 187 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 MTCO3P11-201ENST00000455103 774 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC233279.1-201ENST00000455300 423 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC022493.1-201ENST00000492984 337 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 GZMAP1-201ENST00000503054 631 ntBASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.25□□□□□ -2.05
VCX3AQ9NNX9 CDH12P4-201ENST00000517835 295 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms