Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AL365440.1-201ENST00000436135 2167 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 SNORD51-201ENST00000384320 80 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AP000567.1-201ENST00000406413 156 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 RNU6-248P-201ENST00000410720 107 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 RNU6-195P-201ENST00000411352 109 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC078974.1-201ENST00000411597 223 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC091286.1-201ENST00000431233 461 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC112653.1-201ENST00000443851 386 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 RPL23AP14-201ENST00000468281 468 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 ST13P14-201ENST00000474095 734 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 RPS4XP22-201ENST00000480755 780 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 RPL31P13-201ENST00000484151 370 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AP003181.2-201ENST00000528941 181 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC103843.2-201ENST00000530523 682 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC123904.2-201ENST00000548059 300 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC009063.1-201ENST00000563342 702 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC060771.1-201ENST00000582031 164 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 HMGN1P30-201ENST00000589286 268 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AL359999.1-201ENST00000604513 294 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC090578.1-201ENST00000604955 591 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC245389.1-201ENST00000605141 529 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AL021997.1-201ENST00000605757 193 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 AC010149.2-201ENST00000637608 315 ntBASIC3.55□□□□□ -1.84
PCDH9Q9HC56 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDH9Q9HC56 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC017071.1-201ENST00000564407 2204 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 MIR607-201ENST00000385241 96 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC093578.1-201ENST00000415219 368 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 BX295541.1-201ENST00000417774 250 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 RPS3AP44-201ENST00000425466 790 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 ISCA1P6-201ENST00000427740 390 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC010975.2-201ENST00000427781 588 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 BX890604.2-201ENST00000427883 474 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC073063.1-201ENST00000434352 607 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 RPL21P112-201ENST00000434403 463 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC073614.1-201ENST00000438690 650 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 PGBD4P3-201ENST00000440731 581 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 MTND6P13-201ENST00000443510 523 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 NANOGNBP1-201ENST00000448444 480 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 MTCYBP1-201ENST00000454315 1119 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AP1S2P1-201ENST00000457344 379 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 SRRM1P2-201ENST00000464531 1192 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 RN7SL330P-201ENST00000469709 307 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC021382.1-201ENST00000483523 359 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AL358832.1-201ENST00000497800 389 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 HMGB3P15-201ENST00000507326 574 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 IGKV2D-19-201ENST00000523346 262 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AP003122.4-201ENST00000530980 758 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC004024.1-201ENST00000549244 247 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC067852.3-201ENST00000589177 561 ntBASIC3.54□□□□□ -1.84
PCDH9Q9HC56 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDH9Q9HC56 HMGN2P28-201ENST00000606102 262 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms