Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 SEM1P1-201ENST00000506694 209 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 MTATP6P9-201ENST00000515039 680 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC005832.3-201ENST00000537929 631 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC128657.1-201ENST00000549459 145 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 HSPE1P3-201ENST00000559254 309 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC009097.3-201ENST00000563557 1018 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 MIR4435-1-201ENST00000582552 80 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC091057.3-201ENST00000602684 733 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC021749.1-201ENST00000604322 607 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AL355493.4-201ENST00000618530 292 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC004009.2-201ENST00000623016 728 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC010149.2-201ENST00000637608 315 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 RNU4-22P-201ENST00000411058 166 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AL035407.1-201ENST00000429211 571 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AL590233.1-201ENST00000430017 456 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC244505.4-201ENST00000434905 287 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 MTCYBP45-201ENST00000435243 565 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 SSXP5-201ENST00000443473 287 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 Z82190.1-201ENST00000454534 490 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 RPS3P1-201ENST00000456781 192 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 COX7A2P2-201ENST00000505291 250 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC245166.1-201ENST00000521012 253 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC023813.2-201ENST00000564321 469 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 OR4K8P-201ENST00000578842 1048 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AL160237.3-201ENST00000604114 1013 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC106900.2-201ENST00000604994 317 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC243773.3-201ENST00000613270 256 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 MIR6817-201ENST00000615588 66 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC092608.2-201ENST00000624427 218 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 AC084035.1-201ENST00000634543 607 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.16□□□□□ -1.9
RPAP3Q9H6T3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.9
RPAP3Q9H6T3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RPAP3Q9H6T3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RPAP3Q9H6T3 RNA5SP68-201ENST00000363885 119 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 SNORD21-201ENST00000383953 95 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 RNA5SP252-201ENST00000391131 119 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 RN7SKP284-201ENST00000411002 343 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 BMS1P22-201ENST00000414726 313 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AL513477.1-202ENST00000417061 214 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC019178.2-201ENST00000423595 505 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC007742.1-201ENST00000425789 329 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 EZH2P1-201ENST00000431167 291 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 ELOCP26-201ENST00000436067 329 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 SUMO2P2-201ENST00000456482 255 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC005410.1-202ENST00000460347 485 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC003982.1-202ENST00000469928 248 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC090453.1-201ENST00000495560 436 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC114322.1-201ENST00000506771 926 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC119751.4-201ENST00000507498 357 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC026241.1-201ENST00000517873 2142 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 SETP7-201ENST00000552169 453 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AC025588.4-201ENST00000615802 908 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 AL356585.4-201ENST00000623078 1229 ntBASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.15□□□□□ -1.91
RPAP3Q9H6T3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms