Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 MTND5P5-201ENST00000503764 376 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 LRRC34P2-201ENST00000514850 553 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 Y_RNA.693-201ENST00000516641 110 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC104986.1-201ENST00000517978 436 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 IGKV2D-23-201ENST00000518179 286 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 HSPA8P13-201ENST00000523715 472 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 ZNF705CP-201ENST00000530515 889 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 HPRT1P3-201ENST00000539521 576 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AL512360.1-201ENST00000555346 234 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 MIR4795-201ENST00000584182 89 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 BNIP3P23-201ENST00000599655 511 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AL391646.1-201ENST00000603860 190 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 PART1_1.1-201ENST00000611761 217 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AL442067.2-201ENST00000614033 363 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC110994.2-201ENST00000635481 492 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC138915.3-201ENST00000562908 1389 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 FRG1BP-201ENST00000278882 761 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 Y_RNA.1-201ENST00000352915 104 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 FRG1CP-201ENST00000358464 769 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 Y_RNA.394-201ENST00000383942 103 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 RNU6-1103P-201ENST00000384150 107 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 MIR218-2-201ENST00000385006 110 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 SOD2P1-201ENST00000396543 562 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 MIR1305-201ENST00000408300 86 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 Y_RNA.608-201ENST00000410647 95 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AL445669.1-201ENST00000426743 755 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC096632.1-201ENST00000427395 310 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC109583.1-201ENST00000432156 268 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 LSM1P1-201ENST00000438629 273 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 RABEPKP1-201ENST00000440529 1026 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC093019.1-201ENST00000443135 252 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 PPIAP3-201ENST00000450588 505 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 BTF3P5-201ENST00000457252 467 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 RNU7-136P-201ENST00000458819 69 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC026410.2-201ENST00000460281 156 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 KCTD9P5-201ENST00000504141 1170 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC074250.1-201ENST00000511117 192 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 RNU2-46P-201ENST00000517038 113 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 LSM6P2-201ENST00000552208 177 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 RPL21P5-201ENST00000554662 472 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC025678.1-201ENST00000567861 338 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 MIR5186-201ENST00000577504 120 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 MIR544B-201ENST00000582372 78 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC010680.3-201ENST00000604215 520 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 BCRP9-201ENST00000605312 388 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 HSPE1P14-201ENST00000605812 302 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 YWHAEP7-203ENST00000622054 312 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC091953.5-201ENST00000622919 233 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 MAPK10-372ENST00000641954 3413 ntBASIC3.87□□□□□ -1.79
EBF3Q9H4W6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
EBF3Q9H4W6 SAGE2P-201ENST00000420011 2126 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms