Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 AP003497.1-201ENST00000528472 562 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC012435.1-202ENST00000568772 240 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 MIR4325-201ENST00000583049 90 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 AP000403.1-201ENST00000603349 851 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC092354.1-201ENST00000606057 376 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 AL355810.1-201ENST00000614629 552 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 TAB3P1-202ENST00000452645 1634 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 SRP72P2-201ENST00000344851 1979 ntBASIC3.87□□□□□ -1.79
USP44Q9H0E7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
USP44Q9H0E7 AC066616.2-201ENST00000559334 1481 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 RNU6-600P-201ENST00000362524 99 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 RNU6-853P-201ENST00000364306 107 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 RNU6-1078P-201ENST00000364522 103 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 RNU6-882P-201ENST00000391025 103 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 AL136372.1-201ENST00000403060 228 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 RNU2-43P-201ENST00000410306 190 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 TOMM22P1-201ENST00000418578 312 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.86□□□□□ -1.79
USP44Q9H0E7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.86□□□□□ -1.79
USP44Q9H0E7 RPL35AP22-201ENST00000436855 335 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.86□□□□□ -1.79
USP44Q9H0E7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.86□□□□□ -1.79
USP44Q9H0E7 SNRPFP4-201ENST00000456366 242 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 RPL30P9-201ENST00000465586 330 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 RPL23AP41-201ENST00000484754 458 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 OR2A20P-203ENST00000498397 1268 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 AC105313.1-201ENST00000509121 353 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 RNA5SP217-201ENST00000515959 91 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 AC013828.2-201ENST00000532487 235 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.86□□□□□ -1.79
USP44Q9H0E7 MIR4307-201ENST00000582802 84 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 WISP1-OT1-201ENST00000602893 642 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP44Q9H0E7 AL353748.2-201ENST00000622148 471 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 AC091931.1-201ENST00000623488 728 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 AC092192.1-201ENST00000633154 1018 ntBASIC3.86□□□□□ -1.79
USP44Q9H0E7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.86□□□□□ -1.79
USP44Q9H0E7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP44Q9H0E7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.86□□□□□ -1.79
USP44Q9H0E7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP44Q9H0E7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP44Q9H0E7 RNU6-50P-201ENST00000362356 103 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 RNU6-223P-201ENST00000362830 107 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 RNU6-660P-201ENST00000364566 109 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 SNORD116-1-201ENST00000384335 95 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 MIR128-1-201ENST00000384921 82 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 SNORA48.5-201ENST00000391143 135 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 AL021407.1-201ENST00000404531 386 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 AL365338.1-201ENST00000422282 858 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 FAM103A2P-201ENST00000444122 354 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 BMI1P1-201ENST00000445879 941 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 SETP11-201ENST00000473027 690 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 AC092451.1-201ENST00000480211 153 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 RPS4XP13-201ENST00000483219 789 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 HMGB1P36-201ENST00000487709 576 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 AP001086.1-201ENST00000494882 321 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 OR5BM1P-201ENST00000512021 366 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 SNORA31.8-201ENST00000516327 108 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 TPMTP1-201ENST00000592307 737 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 BCRP9-201ENST00000605312 388 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 AL591516.1-201ENST00000611326 274 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP44Q9H0E7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.85□□□□□ -1.79
USP44Q9H0E7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
USP44Q9H0E7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP44Q9H0E7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP44Q9H0E7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP44Q9H0E7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP44Q9H0E7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.84□□□□□ -1.79
USP44Q9H0E7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP44Q9H0E7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.84□□□□□ -1.79
USP44Q9H0E7 MIR422A-201ENST00000362286 90 ntBASIC3.84□□□□□ -1.79
USP44Q9H0E7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USP44Q9H0E7 RNU6-754P-201ENST00000391166 107 ntBASIC3.84□□□□□ -1.79
USP44Q9H0E7 RNU4-65P-201ENST00000410473 140 ntBASIC3.84□□□□□ -1.79
USP44Q9H0E7 AL359704.1-201ENST00000411586 781 ntBASIC3.84□□□□□ -1.79
USP44Q9H0E7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.84□□□□□ -1.79
USP44Q9H0E7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.84□□□□□ -1.79
USP44Q9H0E7 AL365184.2-201ENST00000431139 435 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms