Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MTCO1P31-201ENST00000506355 492 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.29□□□□□ -2.04
TRIM4Q9C037 OR4R2P-201ENST00000530815 597 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM4Q9C037 AL138976.2-201ENST00000563989 694 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 OR4K7P-201ENST00000580232 945 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 AC067747.1-201ENST00000608026 250 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.29□□□□□ -2.04
TRIM4Q9C037 AL031601.2-202ENST00000622650 282 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 AC068620.4-201ENST00000636730 1182 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM4Q9C037 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM4Q9C037 AC002543.1-201ENST00000299783 1954 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM4Q9C037 AL359851.1-201ENST00000569460 4997 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 RNU6-543P-201ENST00000362576 108 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 Y_RNA.355-201ENST00000365462 98 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 RNU6-821P-201ENST00000390995 107 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 BTF3P7-201ENST00000407097 488 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 AC068587.2-201ENST00000478386 781 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 RPL36AP21-201ENST00000490372 323 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 RPL9P6-201ENST00000492764 598 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 MTCO3P42-201ENST00000509488 518 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 MTCO3P39-201ENST00000514812 518 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 CKS1BP1-201ENST00000555221 240 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM4Q9C037 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM4Q9C037 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.28□□□□□ -2.04
TRIM4Q9C037 CENPCP1-201ENST00000533085 2578 ntBASIC2.28□□□□□ -2.04
TRIM4Q9C037 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
TRIM4Q9C037 AC010680.1-201ENST00000590024 3590 ntBASIC2.28□□□□□ -2.05
TRIM4Q9C037 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 SNORA41-201ENST00000384675 132 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 AL512504.1-201ENST00000415494 778 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 AL356320.2-201ENST00000417263 507 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 RAD1P2-201ENST00000446414 663 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 RPL23AP42-201ENST00000471152 471 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 GZMAP1-201ENST00000503054 631 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM4Q9C037 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 FAM60BP-201ENST00000578364 658 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 AC079610.2-201ENST00000604818 690 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 AC098657.3-201ENST00000620434 263 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 AC017104.5-201ENST00000637647 639 ntBASIC2.27□□□□□ -2.05
TRIM4Q9C037 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
TRIM4Q9C037 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM4Q9C037 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM4Q9C037 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.26□□□□□ -2.05
TRIM4Q9C037 MTCO1P6-201ENST00000481192 1384 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 RNU5D-1-201ENST00000363299 116 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 RNA5SP138-201ENST00000365098 114 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 RNU6-441P-201ENST00000384545 106 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 RNA5SP213-201ENST00000391031 106 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 GSTA9P-201ENST00000406231 611 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 RPS15AP38-201ENST00000413110 372 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM4Q9C037 RPL7P30-201ENST00000420888 709 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 TMEM167AP1-201ENST00000423409 219 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC010099.1-201ENST00000455434 375 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC078857.1-201ENST00000469870 667 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM4Q9C037 RNA5SP364-201ENST00000516938 78 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC087272.1-201ENST00000523624 533 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC021269.2-201ENST00000532318 330 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC012254.4-201ENST00000588843 273 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AL136981.2-201ENST00000617319 734 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC073968.1-201ENST00000618594 637 ntBASIC2.26□□□□□ -2.05
TRIM4Q9C037 AC012640.5-201ENST00000623897 319 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms