Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 SNORA40.3-201ENST00000390964 122 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 RPL7P60-201ENST00000397636 735 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AL391417.1-201ENST00000404100 426 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 HMGN1P14-201ENST00000412459 517 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AC002075.2-201ENST00000425207 252 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AC137499.1-201ENST00000427602 88 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 MTND1P28-201ENST00000435623 950 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AC122718.1-201ENST00000439448 744 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 RPS29P7-201ENST00000439662 171 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 TAF9P1-201ENST00000445421 515 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 TAF9P2-201ENST00000454958 515 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 MTND1P12-201ENST00000455231 147 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 SNORD97-201ENST00000459187 142 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 RPL37P6-201ENST00000460682 294 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 FAM133DP-201ENST00000464802 691 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 MTND1P3-201ENST00000484956 952 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AC010587.1-201ENST00000505809 469 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 Y_RNA.672-201ENST00000516289 104 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 RNU2-10P-201ENST00000516375 211 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 Y_RNA.695-201ENST00000516715 107 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 SNORD59.2-201ENST00000516873 68 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 HMGB1P14-201ENST00000557424 591 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 TRAV28-201ENST00000557548 323 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AC034105.3-201ENST00000565294 442 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AC012414.6-201ENST00000568241 401 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 HMGN1P30-201ENST00000589286 268 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AL158063.1-201ENST00000615349 536 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 AC026422.1-201ENST00000623961 452 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 CU459211.1-201ENST00000635667 749 ntBASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 RNA5SP97-201ENST00000365006 84 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 RN7SKP202-201ENST00000410439 330 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 RN7SKP142-201ENST00000411236 328 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 RPS7P13-201ENST00000413955 498 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 BTF3L4P3-201ENST00000418879 476 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AL589872.1-201ENST00000426602 288 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 RPL23AP69-201ENST00000431134 458 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 FCF1P1-201ENST00000432690 571 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 Z82210.1-201ENST00000440037 231 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 MTND2P22-201ENST00000444325 1033 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 RNU7-170P-201ENST00000459303 61 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 KC877373.1-201ENST00000479066 408 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AL049830.2-201ENST00000480072 201 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 RN7SKP209-201ENST00000516888 304 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AC007991.1-201ENST00000522680 631 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AP002453.2-201ENST00000533503 320 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AL356057.1-201ENST00000533798 831 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 HMGB1P6-201ENST00000569046 646 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AC137800.2-201ENST00000574375 120 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 MIR5685-201ENST00000579080 79 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 MIR3682-201ENST00000581338 84 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AC110760.3-201ENST00000598794 467 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AC025594.3-201ENST00000613068 790 ntBASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HERPUD2Q9BSE4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 U3.11-201ENST00000364476 212 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 MIR554-201ENST00000384874 96 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 MIR134-201ENST00000385258 73 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 SNORA11-201ENST00000408789 128 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 RPS3AP3-201ENST00000411933 242 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 Z85995.1-201ENST00000415547 335 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AL139247.1-201ENST00000422768 325 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 HMGB1P27-201ENST00000431429 603 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 USP9YP15-201ENST00000442391 422 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 MTATP6P30-201ENST00000443540 664 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms