Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RPL23AP82-202ENST00000427528 469 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC008850.1-201ENST00000427546 362 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 RPL7L1P10-201ENST00000427790 463 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AL590383.1-201ENST00000428602 75 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 SAR1AP4-201ENST00000429225 591 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AL356867.1-201ENST00000429623 299 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 TAAR7P-201ENST00000436141 242 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 TPT1P14-201ENST00000448018 505 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 OR2A20P-203ENST00000498397 1268 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX3Q99909 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX3Q99909 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.97□□□□□ -1.93
SSX3Q99909 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX3Q99909 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX3Q99909 RNU6-1256P-201ENST00000516539 103 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 RNU6-56P-201ENST00000516986 93 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 RNU6-840P-201ENST00000517275 65 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.97□□□□□ -1.93
SSX3Q99909 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.97□□□□□ -1.93
SSX3Q99909 CCNG2P1-201ENST00000549521 1000 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC008015.1-201ENST00000555505 465 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AL158211.1-201ENST00000566763 763 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC012435.1-202ENST00000568772 240 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.97□□□□□ -1.93
SSX3Q99909 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.97□□□□□ -1.93
SSX3Q99909 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC010591.1-201ENST00000603941 649 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC018638.7-201ENST00000605836 1114 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC091965.4-201ENST00000607691 587 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC079416.3-201ENST00000624479 549 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC091965.5-201ENST00000624785 342 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 AC009093.8-201ENST00000641769 292 ntBASIC2.97□□□□□ -1.93
SSX3Q99909 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SSX3Q99909 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
SSX3Q99909 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.96□□□□□ -1.93
SSX3Q99909 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
SSX3Q99909 FAM35BP-202ENST00000497389 3337 ntBASIC2.96□□□□□ -1.93
SSX3Q99909 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
SSX3Q99909 AC004972.1-201ENST00000623934 2209 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSX3Q99909 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SSX3Q99909 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SSX3Q99909 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SSX3Q99909 RNU6-270P-201ENST00000364131 105 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 SNORA23-201ENST00000365128 182 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 SNORA36C-201ENST00000384289 132 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AL136116.1-201ENST00000403591 381 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 HMGN1P24-201ENST00000412282 298 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX3Q99909 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.96□□□□□ -1.94
SSX3Q99909 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX3Q99909 NDUFB4P7-201ENST00000423198 363 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 YME1L1P1-201ENST00000429435 297 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 HMGN2P31-201ENST00000432430 273 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX3Q99909 AL512844.2-201ENST00000433990 593 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 BX679664.1-201ENST00000434429 253 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 PDSS1P2-201ENST00000449397 678 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC106707.2-201ENST00000484182 374 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 RPS3AP22-201ENST00000488297 769 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 FCF1P3-201ENST00000496394 590 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC135721.1-201ENST00000497954 479 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC098862.1-201ENST00000504991 413 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC006499.5-201ENST00000505037 514 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.96□□□□□ -1.94
SSX3Q99909 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX3Q99909 MRPS33P3-201ENST00000513456 322 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 DUXAP2-201ENST00000519198 589 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX3Q99909 OR5G4P-201ENST00000525251 760 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.96□□□□□ -1.94
SSX3Q99909 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX3Q99909 AC004024.1-201ENST00000549244 247 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.96□□□□□ -1.94
SSX3Q99909 HIGD1AP1-201ENST00000550979 275 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.96□□□□□ -1.94
SSX3Q99909 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.96□□□□□ -1.94
SSX3Q99909 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.96□□□□□ -1.94
SSX3Q99909 AC090616.2-202ENST00000584248 222 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.96□□□□□ -1.94
SSX3Q99909 NIFKP6-201ENST00000598115 845 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 DUXAP4-201ENST00000603046 613 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 PRELID3BP8-201ENST00000604148 295 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSX3Q99909 AP000676.3-201ENST00000623299 569 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC112204.3-201ENST00000623822 332 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC090617.7-201ENST00000623952 126 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC092192.1-201ENST00000633154 1018 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC110079.1-202ENST00000635213 138 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AP000553.6-201ENST00000641242 118 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AC119674.1-207ENST00000641355 633 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SSX3Q99909 CCT4P2-201ENST00000233836 1548 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 AP003122.5-201ENST00000527668 3766 ntBASIC2.96□□□□□ -1.94
SSX3Q99909 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSX3Q99909 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSX3Q99909 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms