Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL37P3-201ENST00000456825 293 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AL161747.1-201ENST00000480068 358 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC068587.1-201ENST00000483613 781 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AL163973.1-201ENST00000484753 577 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC093267.1-201ENST00000489176 961 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-1038P-201ENST00000516516 104 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-1088P-201ENST00000516850 104 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RANP9-201ENST00000519957 271 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 COX6CP8-201ENST00000522620 226 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AP001804.3-201ENST00000525146 880 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC098848.2-201ENST00000588023 330 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC011468.4-201ENST00000603942 409 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 uc_338.9-201ENST00000617424 182 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RMST_9.1-201ENST00000619945 193 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC090337.1-201ENST00000579651 2074 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC105074.1-201ENST00000623380 3095 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AL512646.1-201ENST00000269395 1077 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AL133412.1-201ENST00000380194 2992 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR514A2-201ENST00000385131 88 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR514A3-201ENST00000385132 88 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR195-201ENST00000385194 87 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR1302-3-201ENST00000408128 138 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR1179-201ENST00000408703 91 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 RN7SKP235-201ENST00000410662 305 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR1911-201ENST00000410783 80 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 RPS12P24-201ENST00000412619 387 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL23AP46-201ENST00000438548 490 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR2053-201ENST00000459295 91 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 RN7SL817P-201ENST00000480777 288 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 SMURF2P1-201ENST00000514992 481 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-1271P-201ENST00000517049 105 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 IGKV2-36-201ENST00000519999 223 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 MRPL49P2-201ENST00000521066 465 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC006064.5-201ENST00000541782 248 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 VN1R84P-201ENST00000593697 235 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AL670379.11-201ENST00000604059 253 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AL670379.10-201ENST00000604330 253 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AL670379.12-201ENST00000605291 253 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC121334.2-201ENST00000605387 271 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AL670379.9-201ENST00000605428 253 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC015813.4-201ENST00000610469 179 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AL138721.1-201ENST00000616756 179 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC009318.4-201ENST00000620496 486 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC055839.1-201ENST00000634467 498 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 U6.101-201ENST00000637707 76 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 OR52H1-202ENST00000641796 1061 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.47□□□□□ -1.69
CDK5RAP1Q96SZ6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.46□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CDK5RAP1Q96SZ6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDK5RAP1Q96SZ6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 Y_RNA.47-201ENST00000362697 108 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU1-20P-201ENST00000363314 162 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RN7SKP227-201ENST00000364445 330 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 HMGB1P17-201ENST00000403495 628 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 HDGFP1-201ENST00000405943 252 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU2-3P-201ENST00000410144 191 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 EIF4EP1-201ENST00000422311 642 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RPL31P12-201ENST00000422587 358 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 PRPS1P1-201ENST00000445305 876 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms