Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AL022578.1-201ENST00000439330 1433 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 RNU6-777P-201ENST00000364265 104 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 Y_RNA.560-201ENST00000384689 102 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AL591034.1-201ENST00000407447 340 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 RN7SKP285-201ENST00000410137 318 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 RNU2-15P-201ENST00000410692 191 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC126124.2-201ENST00000413542 321 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AL117351.1-201ENST00000438864 766 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 MTND2P4-201ENST00000445034 1004 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 RPL23AP31-201ENST00000456160 467 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 SUMO2P2-201ENST00000456482 255 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AL136097.1-201ENST00000456945 913 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 MEMO1P3-201ENST00000459811 302 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC008481.1-201ENST00000463278 396 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC092754.2-201ENST00000463506 460 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 ST13P14-201ENST00000474095 734 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC072039.1-201ENST00000477611 581 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 OR2A20P-203ENST00000498397 1268 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 COX6CP8-201ENST00000522620 226 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AL163153.1-201ENST00000554223 283 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 MIR4738-201ENST00000579134 87 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 MIR3162-201ENST00000581818 82 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC106028.5-201ENST00000610332 395 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 MIR7844-201ENST00000616161 122 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC095031.1-201ENST00000623685 672 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AF246928.1-201ENST00000623768 87 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AL356596.1-201ENST00000624230 379 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 AC091925.2-201ENST00000625059 256 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NECTIN4Q96NY8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC233263.6-201ENST00000631132 1963 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC097714.1-201ENST00000511272 1647 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 RNU6-173P-201ENST00000364215 104 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 RNU6-660P-201ENST00000364566 109 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 RNA5SP126-201ENST00000365092 109 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 MIR1302-8-201ENST00000408342 128 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 RPS15AP38-201ENST00000413110 372 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC083875.1-201ENST00000419509 405 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC007742.1-201ENST00000425789 329 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 PSMA6P3-201ENST00000428242 164 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AL590233.1-201ENST00000430017 456 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 NEK4P1-201ENST00000433383 879 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 SNRPEP4-201ENST00000435815 279 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 ELOCP26-201ENST00000436067 329 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 LARP1BP3-201ENST00000437229 869 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC005297.2-201ENST00000450430 606 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 RPL30P9-201ENST00000465586 330 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC109486.1-201ENST00000486833 374 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 VN1R104P-201ENST00000505115 1009 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC093809.1-201ENST00000509155 340 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC022861.1-201ENST00000522981 663 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 SNRPGP16-201ENST00000533275 226 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 DUXAP11-201ENST00000603858 526 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC105129.3-201ENST00000605455 485 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 uc_338.1-201ENST00000612113 180 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AL110115.1-201ENST00000614396 364 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC022149.2-201ENST00000621061 203 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC110801.1-201ENST00000623590 212 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC007494.3-201ENST00000624660 743 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AC092192.1-201ENST00000633154 1018 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AP003399.1-201ENST00000637534 361 ntBASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NECTIN4Q96NY8 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms