Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 OR10R1P-201ENST00000441524 1141 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 AL357520.1-201ENST00000441557 453 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 AL157827.1-201ENST00000447622 132 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.4□□□□□ -2.19
CFAP54Q96N23 RWDD4P2-201ENST00000426392 563 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 RWDD4P1-201ENST00000488019 565 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 RNU1-40P-201ENST00000516816 164 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 RNU1-97P-201ENST00000516872 164 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 NPM1P52-201ENST00000518264 846 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.4□□□□□ -2.19
CFAP54Q96N23 MIRLET7G-201ENST00000362280 84 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 RNU6-198P-201ENST00000384258 104 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.4□□□□□ -2.19
CFAP54Q96N23 AL096701.2-201ENST00000416920 238 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 NEFMP1-201ENST00000443423 1006 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 RPL34P26-201ENST00000445636 354 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.4□□□□□ -2.19
CFAP54Q96N23 AC073901.1-201ENST00000462471 408 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 RN7SKP265-201ENST00000516448 223 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 RNU6-113P-201ENST00000516653 101 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 AL137072.1-201ENST00000603444 466 ntBASIC1.4□□□□□ -2.19
CFAP54Q96N23 MTCYBP45-201ENST00000435243 565 ntBASIC1.39□□□□□ -2.19
CFAP54Q96N23 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.39□□□□□ -2.19
CFAP54Q96N23 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.39□□□□□ -2.19
CFAP54Q96N23 RPS12P24-201ENST00000412619 387 ntBASIC1.39□□□□□ -2.19
CFAP54Q96N23 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.39□□□□□ -2.19
CFAP54Q96N23 AC114973.1-201ENST00000429057 632 ntBASIC1.39□□□□□ -2.19
CFAP54Q96N23 GTF2IP7-202ENST00000436677 309 ntBASIC1.39□□□□□ -2.19
CFAP54Q96N23 AP000873.1-201ENST00000463987 400 ntBASIC1.39□□□□□ -2.19
CFAP54Q96N23 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.39□□□□□ -2.19
CFAP54Q96N23 RNU6-35P-201ENST00000384530 107 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 RPL26P37-201ENST00000411983 438 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC007375.1-201ENST00000554513 578 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC116447.1-201ENST00000613153 453 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.38□□□□□ -2.19
CFAP54Q96N23 MIR365B-201ENST00000362317 111 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 RNU6-461P-201ENST00000364195 107 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 Y_RNA.390-201ENST00000383932 102 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 AL445183.3-201ENST00000414168 502 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC092902.1-201ENST00000486999 259 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC090453.1-201ENST00000495560 436 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 GOLGA5P1-201ENST00000507317 980 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC097504.2-201ENST00000608088 454 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC010329.2-201ENST00000595195 2737 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC004223.1-201ENST00000479840 271 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.38□□□□□ -2.19
CFAP54Q96N23 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC084364.2-201ENST00000546924 395 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 AL109653.1-201ENST00000603091 248 ntBASIC1.38□□□□□ -2.19
CFAP54Q96N23 AC025263.3-201ENST00000622965 1396 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 AL596028.1-201ENST00000326971 197 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 RNA5SP239-201ENST00000410218 129 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.37□□□□□ -2.19
CFAP54Q96N23 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.37□□□□□ -2.19
CFAP54Q96N23 AC107032.1-201ENST00000485945 480 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.37□□□□□ -2.19
CFAP54Q96N23 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 SNORA31.26-201ENST00000517250 137 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 CBX3P8-201ENST00000532412 525 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.37□□□□□ -2.19
CFAP54Q96N23 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.37□□□□□ -2.19
CFAP54Q96N23 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CFAP54Q96N23 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CFAP54Q96N23 PABPC1P9-201ENST00000426076 1612 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CFAP54Q96N23 Y_RNA.85-201ENST00000363014 111 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.37□□□□□ -2.19
CFAP54Q96N23 RNA5SP384-201ENST00000516615 116 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CFAP54Q96N23 ZNF734P-201ENST00000419494 1534 ntBASIC1.37□□□□□ -2.19
CFAP54Q96N23 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CFAP54Q96N23 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CFAP54Q96N23 SNRPEP2-201ENST00000397592 279 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC092638.1-201ENST00000411966 1275 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC007390.1-201ENST00000415722 356 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 AP001029.3-201ENST00000588063 596 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 uc_338.12-201ENST00000616344 181 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 AL109933.3-201ENST00000619095 188 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CFAP54Q96N23 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 RPL19P1-201ENST00000411635 428 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 SEC63P1-201ENST00000425785 1258 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.36□□□□□ -2.19
CFAP54Q96N23 CFTRP1-201ENST00000456646 183 ntBASIC1.36□□□□□ -2.19
CFAP54Q96N23 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms