Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC093156.1-201ENST00000440382 670 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 Z99127.3-201ENST00000448158 395 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC132479.1-201ENST00000449160 144 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 HMGB3P22-202ENST00000451823 572 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 snoU13.4-201ENST00000458916 104 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 SNRPGP3-201ENST00000469405 227 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 RPS4XP13-201ENST00000483219 789 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC023194.1-201ENST00000493084 308 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC093278.1-201ENST00000494700 600 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 SAP18P1-201ENST00000512058 390 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 RNU6-1220P-201ENST00000517126 108 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 DEFB108D-201ENST00000527787 222 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 OR8R1P-201ENST00000543943 764 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 SNORD84-203ENST00000584275 78 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC008277.2-201ENST00000605196 797 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC092954.2-201ENST00000609103 430 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 RNA5SP196-201ENST00000625967 102 ntBASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.33□□□□□ -1.72
CDK5RAP3Q96JB5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 ELF2P3-201ENST00000445099 1506 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 Y_RNA.372-201ENST00000365599 102 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 RNU6-1103P-201ENST00000384150 107 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 MIR199A2-201ENST00000385289 110 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 CALM2P3-201ENST00000400429 449 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 HLFP1-201ENST00000402375 499 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 PPIAP31-201ENST00000405422 495 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AC099677.1-201ENST00000420575 175 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 NANOGP10-201ENST00000453325 895 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AC078785.3-201ENST00000476607 425 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AC026801.2-201ENST00000515352 425 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AC022695.1-201ENST00000522089 237 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 SUB1P2-201ENST00000556401 297 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 MIR4801-201ENST00000582704 82 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AC053481.4-201ENST00000583164 216 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AL136363.1-201ENST00000605349 337 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AL359880.1-201ENST00000621879 266 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AL136313.1-201ENST00000624804 202 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AC019226.1-201ENST00000625666 515 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 AL645937.1-201ENST00000641739 1652 ntBASIC4.32□□□□□ -1.72
CDK5RAP3Q96JB5 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 RNU4-12P-201ENST00000365233 139 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 RNU6-169P-201ENST00000365336 107 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 RNU6-1074P-201ENST00000383995 104 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AL590002.1-201ENST00000406554 418 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 BTF3P7-201ENST00000407097 488 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 NUTF2P7-201ENST00000453086 375 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 RPL21P104-201ENST00000464143 478 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AL049714.1-201ENST00000466686 347 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 VN1R105P-201ENST00000486595 910 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 RNA5SP164-201ENST00000516533 110 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 IGKV2-23-201ENST00000518729 323 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AP001893.2-201ENST00000526949 202 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AC018630.1-201ENST00000541376 925 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AC107016.1-201ENST00000550463 337 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AC090877.1-201ENST00000561418 344 ntBASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK5RAP3Q96JB5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms