Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ELOCP5-201ENST00000604924 333 ntBASIC5.39□□□□□ -1.55
IFT43Q96FT9 HMGN2P28-201ENST00000606102 262 ntBASIC5.39□□□□□ -1.55
IFT43Q96FT9 AL355810.1-201ENST00000614629 552 ntBASIC5.39□□□□□ -1.55
IFT43Q96FT9 AC073869.10-201ENST00000642016 354 ntBASIC5.39□□□□□ -1.55
IFT43Q96FT9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
IFT43Q96FT9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
IFT43Q96FT9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
IFT43Q96FT9 AL672167.1-204ENST00000641875 3017 ntBASIC5.39□□□□□ -1.55
IFT43Q96FT9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 SCARNA15-201ENST00000607520 4325 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 FAM91A3P-201ENST00000456826 2544 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
IFT43Q96FT9 AC010615.1-201ENST00000594254 1764 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
IFT43Q96FT9 U8.4-201ENST00000363626 134 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 RNU6-1303P-201ENST00000364841 107 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 OR1L6-202ENST00000373684 1044 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 Y_RNA.515-201ENST00000384535 112 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 RNU6-178P-201ENST00000384631 104 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 MIR1271-201ENST00000408537 86 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 RPL21P2-201ENST00000440049 481 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 AL389915.2-201ENST00000454576 441 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 SNORD127-201ENST00000458892 86 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 RPS23P1-201ENST00000491662 432 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 AC008953.1-201ENST00000497334 318 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 RPS27AP13-201ENST00000498403 237 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 Y_RNA.715-201ENST00000517082 110 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 RN7SKP234-201ENST00000517173 224 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 AP000889.1-201ENST00000530968 660 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 AC027369.5-201ENST00000533838 755 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 SDR42E1P2-201ENST00000614861 481 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 U6.104-201ENST00000637979 90 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 AC233263.6-201ENST00000631132 1963 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 MAPK10-349ENST00000641767 3661 ntBASIC5.38□□□□□ -1.55
IFT43Q96FT9 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
IFT43Q96FT9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.38□□□□□ -1.55
IFT43Q96FT9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
IFT43Q96FT9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
IFT43Q96FT9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
IFT43Q96FT9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 AC100778.3-201ENST00000580060 1750 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 STX3-208ENST00000641815 3236 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
IFT43Q96FT9 Y_RNA.276-201ENST00000364732 109 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 Y_RNA.314-201ENST00000365114 102 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 RNU2-43P-201ENST00000410306 190 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 SYF2P2-201ENST00000417620 583 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 AL121871.1-201ENST00000443413 436 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 RNA5SP103-201ENST00000459503 118 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 RPSAP50-201ENST00000481955 852 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 SNORA31.3-201ENST00000516029 96 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 Y_RNA.680-201ENST00000516441 93 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 SNORA40.14-201ENST00000516543 86 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 IGHV3-76-201ENST00000522465 295 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 OR5D17P-201ENST00000531492 978 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 RPL10P14-201ENST00000565265 298 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 AC109446.1-201ENST00000566172 220 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 MIR5692A1-201ENST00000580523 69 ntBASIC5.37□□□□□ -1.55
IFT43Q96FT9 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
IFT43Q96FT9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
IFT43Q96FT9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
IFT43Q96FT9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.36□□□□□ -1.55
IFT43Q96FT9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
IFT43Q96FT9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.36□□□□□ -1.55
IFT43Q96FT9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.36□□□□□ -1.55
IFT43Q96FT9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
IFT43Q96FT9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
IFT43Q96FT9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
IFT43Q96FT9 AC026523.2-201ENST00000625039 7739 ntBASIC5.36□□□□□ -1.55
IFT43Q96FT9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
IFT43Q96FT9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
IFT43Q96FT9 RNA5SP305-201ENST00000362665 119 ntBASIC5.36□□□□□ -1.55
IFT43Q96FT9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
IFT43Q96FT9 SNORA48.4-201ENST00000391089 134 ntBASIC5.36□□□□□ -1.55
IFT43Q96FT9 RN7SKP125-201ENST00000410481 302 ntBASIC5.36□□□□□ -1.55
IFT43Q96FT9 RPL21P90-201ENST00000415692 466 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms