Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 HMGB1P5-201ENST00000255320 642 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 RNA5SP295-201ENST00000362655 121 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 RNU6-353P-201ENST00000364266 108 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 RNU6-619P-201ENST00000365146 108 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 OR1L1-202ENST00000373686 1083 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 RNU6-356P-201ENST00000384140 107 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AL024474.1-201ENST00000404655 591 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 MTND4P3-201ENST00000417829 541 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AC106872.3-201ENST00000495104 446 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 RNU6-276P-201ENST00000516114 96 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AC060766.3-201ENST00000591442 263 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AP003973.1-201ENST00000604639 691 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AC112220.2-201ENST00000605513 533 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 AC109454.4-201ENST00000623411 649 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 MTND5P31-201ENST00000419366 1374 ntBASIC2.23□□□□□ -2.05
SHROOM3Q8TF72 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AC025125.1-201ENST00000624743 1922 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AC023347.2-201ENST00000433994 462 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AC007677.1-201ENST00000445757 515 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 NPM1P49-201ENST00000448027 714 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 BX248409.1-201ENST00000455497 255 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 RPL30P11-201ENST00000495304 339 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 BOLA3P3-201ENST00000505182 232 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 RNU6-885P-201ENST00000516607 104 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 RN7SKP277-201ENST00000516895 283 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AL161713.1-201ENST00000555538 145 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 MTCYBP23-201ENST00000558717 1102 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AL049838.1-201ENST00000563647 981 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 MIR3912-201ENST00000577566 105 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AC007687.1-201ENST00000602704 304 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AC011468.4-201ENST00000603942 409 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AC092954.1-201ENST00000609121 445 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AC022306.3-201ENST00000619930 550 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 MTND5P6-201ENST00000422338 1798 ntBASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.22□□□□□ -2.05
SHROOM3Q8TF72 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 MTCO1P56-201ENST00000401674 224 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 TMSB4XP8-201ENST00000402089 135 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 RNU6-272P-201ENST00000411028 104 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 TMSB4XP6-201ENST00000415187 135 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AC027644.1-201ENST00000419595 298 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 FNDC3CP-201ENST00000420795 1155 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 TMSB4XP1-201ENST00000424567 135 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 OR51AB1P-201ENST00000429046 620 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 MTCO1P53-201ENST00000441633 699 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AC011753.1-201ENST00000451001 220 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 SNORD108-201ENST00000459332 71 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AC010460.2-201ENST00000509054 677 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AC138915.2-201ENST00000569776 97 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AP005137.2-201ENST00000609238 400 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AL157392.4-201ENST00000609756 345 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AC010975.3-201ENST00000618727 978 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AL158163.2-201ENST00000619110 700 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 AC006386.1-201ENST00000619436 415 ntBASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.21□□□□□ -2.05
SHROOM3Q8TF72 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AC092881.1-201ENST00000638218 2733 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 RNA5SP391-201ENST00000363456 119 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 U3.15-201ENST00000365398 212 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 MIR122-201ENST00000385044 85 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms