Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC089999.1-201ENST00000460336 374 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.42□□□□□ -2.18
CHD6Q8TD26 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.42□□□□□ -2.18
CHD6Q8TD26 HMGB1P47-201ENST00000511281 589 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.42□□□□□ -2.18
CHD6Q8TD26 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD6Q8TD26 FO624990.1-201ENST00000636373 85 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 AC138649.5-201ENST00000637456 137 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHD6Q8TD26 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD6Q8TD26 USP9YP7-201ENST00000436723 430 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 USP9YP32-201ENST00000452432 430 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD6Q8TD26 AC124283.4-201ENST00000581815 456 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.42□□□□□ -2.18
CHD6Q8TD26 DUXAP11-201ENST00000603858 526 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 AL049779.4-201ENST00000604500 156 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 AC012150.2-201ENST00000621300 544 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.42□□□□□ -2.18
CHD6Q8TD26 Y_RNA.324-201ENST00000365165 102 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 RNA5SP338-201ENST00000410495 85 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 AF274854.1-201ENST00000413236 615 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 PTP4A1P1-201ENST00000420539 515 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.41□□□□□ -2.18
CHD6Q8TD26 HIGD1AP11-201ENST00000438361 280 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.41□□□□□ -2.18
CHD6Q8TD26 AC024614.2-201ENST00000577584 372 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 AP002967.1-201ENST00000624203 539 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.41□□□□□ -2.18
CHD6Q8TD26 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHD6Q8TD26 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.41□□□□□ -2.18
CHD6Q8TD26 MRPS36P1-201ENST00000421291 307 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 XKRY2-201ENST00000442362 1093 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.41□□□□□ -2.18
CHD6Q8TD26 AC116447.1-201ENST00000613153 453 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 MTND5P9-201ENST00000503854 1755 ntBASIC1.41□□□□□ -2.18
CHD6Q8TD26 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
CHD6Q8TD26 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
CHD6Q8TD26 RSL24D1P2-201ENST00000445584 366 ntBASIC1.4□□□□□ -2.18
CHD6Q8TD26 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.4□□□□□ -2.18
CHD6Q8TD26 LRRC34P2-201ENST00000514850 553 ntBASIC1.4□□□□□ -2.18
CHD6Q8TD26 SNORA31.11-201ENST00000516528 139 ntBASIC1.4□□□□□ -2.18
CHD6Q8TD26 RNU6-113P-201ENST00000516653 101 ntBASIC1.4□□□□□ -2.18
CHD6Q8TD26 AC084364.2-201ENST00000546924 395 ntBASIC1.4□□□□□ -2.18
CHD6Q8TD26 AC060766.3-201ENST00000591442 263 ntBASIC1.4□□□□□ -2.18
CHD6Q8TD26 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.4□□□□□ -2.18
CHD6Q8TD26 ZNF271P-202ENST00000465539 1970 ntBASIC1.4□□□□□ -2.19
CHD6Q8TD26 RNA5SP354-201ENST00000391247 136 ntBASIC1.4□□□□□ -2.19
CHD6Q8TD26 BX510359.4-201ENST00000423750 193 ntBASIC1.4□□□□□ -2.19
CHD6Q8TD26 AC004854.1-201ENST00000440356 349 ntBASIC1.4□□□□□ -2.19
CHD6Q8TD26 RPS27AP18-201ENST00000515536 459 ntBASIC1.4□□□□□ -2.19
CHD6Q8TD26 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.4□□□□□ -2.19
CHD6Q8TD26 U8.9-201ENST00000365667 134 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 CFTRP1-201ENST00000456646 183 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 AC078918.1-201ENST00000498515 228 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 SNORA31.26-201ENST00000517250 137 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 AC007687.1-201ENST00000602704 304 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 AC009314.1-201ENST00000603871 304 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 MIR924-201ENST00000638017 53 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 HMGN2P19-201ENST00000425149 265 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 AL645568.3-201ENST00000433683 316 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 AP000873.1-201ENST00000463987 400 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 AC110792.2-201ENST00000510278 224 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD6Q8TD26 OR8X1P-201ENST00000534542 869 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CHD6Q8TD26 AL132857.1-201ENST00000555180 708 ntBASIC1.39□□□□□ -2.19
CHD6Q8TD26 RNA5SP27-201ENST00000363839 119 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 RNA5SP138-201ENST00000365098 114 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 FNDC3CP-201ENST00000420795 1155 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.38□□□□□ -2.19
CHD6Q8TD26 RPL9P9-202ENST00000466501 579 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 AC109486.1-201ENST00000486833 374 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 TRAV31-201ENST00000502780 342 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 BOLA3P3-201ENST00000505182 232 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.38□□□□□ -2.19
CHD6Q8TD26 VIS1.1-201ENST00000610517 203 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CHD6Q8TD26 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.38□□□□□ -2.19
CHD6Q8TD26 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHD6Q8TD26 Y_RNA.412-201ENST00000384001 104 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 AL512504.1-201ENST00000415494 778 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 CYCSP48-201ENST00000417124 323 ntBASIC1.38□□□□□ -2.19
CHD6Q8TD26 MTND2P9-201ENST00000422293 931 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms