Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 MIR21-201ENST00000362134 72 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 RNU6-1300P-201ENST00000391046 108 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AL590383.1-201ENST00000428602 75 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 ARPC3P1-201ENST00000437218 533 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC104389.3-201ENST00000445629 235 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AL513328.1-201ENST00000446460 224 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 MTCO2P9-201ENST00000503214 694 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC026436.1-201ENST00000510537 270 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 MTCO1P47-201ENST00000523889 1271 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC024224.1-201ENST00000538284 609 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC009097.3-201ENST00000563557 1018 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 ACTR3BP3-201ENST00000565577 979 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC090330.1-201ENST00000588646 764 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC026790.2-201ENST00000606282 430 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC067747.1-201ENST00000608026 250 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AP005229.2-201ENST00000609980 697 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC004852.3-201ENST00000614131 326 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 AC090772.4-201ENST00000623599 362 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 CTSLP2-204ENST00000629029 392 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 U6.101-201ENST00000637707 76 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.14□□□□□ -2.07
ZIC4Q8N9L1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 FRG1BP-201ENST00000278882 761 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RNU1-105P-201ENST00000363470 161 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RNU6-468P-201ENST00000384003 109 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RNA5SP354-201ENST00000391247 136 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RNA5SP181-201ENST00000410246 98 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 BX682237.1-201ENST00000415016 335 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AL356867.1-201ENST00000429623 299 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AC090774.1-201ENST00000435925 246 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 THAP5P1-201ENST00000439089 262 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RNF2P1-201ENST00000442955 1010 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RNU6-420P-201ENST00000458780 107 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 SEM1P1-201ENST00000506694 209 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AC069306.1-201ENST00000507006 843 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AC022483.1-201ENST00000514020 567 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RNU5A-7P-201ENST00000515979 116 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RNU6-798P-201ENST00000516912 103 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 snoZ278.1-201ENST00000517059 112 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RNA5SP402-201ENST00000517148 110 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AP001189.2-201ENST00000527320 189 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AC060766.3-201ENST00000591442 263 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AP001521.1-201ENST00000609150 300 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AC046143.2-201ENST00000609789 160 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AC025588.4-201ENST00000615802 908 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 AC078880.5-201ENST00000617845 421 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 MIR1291-201ENST00000627649 87 ntBASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.13□□□□□ -2.07
ZIC4Q8N9L1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 NACA3P-201ENST00000359690 648 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 U8.8-201ENST00000365399 135 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 SNORA36C-201ENST00000384289 132 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 MIR506-201ENST00000384998 124 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AL356131.1-201ENST00000405826 414 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 COX6CP18-201ENST00000448769 222 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 MRPL42P4-201ENST00000453267 443 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 snoU13.28-201ENST00000459235 104 ntBASIC2.12□□□□□ -2.07
ZIC4Q8N9L1 MTND4LP3-201ENST00000468320 276 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms