Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 RNA5SP383-201ENST00000362934 120 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 SNORA38.1-201ENST00000364172 131 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 RPL23AP29-201ENST00000397284 453 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 RNU4-72P-201ENST00000410754 173 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AC234781.2-201ENST00000426370 994 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 SNRPEP7-201ENST00000438350 220 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 TRIM60P18-201ENST00000441518 828 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 MTND5P2-201ENST00000442927 1142 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 RSL24D1P3-201ENST00000449255 495 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AL109741.2-201ENST00000455561 343 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AC104563.1-201ENST00000476147 376 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 HSPE1P6-201ENST00000479457 291 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AC068724.1-201ENST00000487100 792 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 RPL30P5-201ENST00000494923 336 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 COX6CP8-201ENST00000522620 226 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 GLUD1P4-201ENST00000590914 418 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AL133507.1-201ENST00000605269 557 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 MIR4275-201ENST00000636486 87 ntBASIC3.23□□□□□ -1.89
RTL3Q8N8U3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RTL3Q8N8U3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 Y_RNA.169-201ENST00000363745 96 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 RNU6-359P-201ENST00000365466 108 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AL953862.1-201ENST00000423016 168 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 DPPA2P1-201ENST00000428060 556 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 OR4K11P-201ENST00000431829 904 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC108734.1-201ENST00000439549 399 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 MTND2P24-201ENST00000453434 806 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC010486.3-201ENST00000511602 785 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 RNU6-798P-201ENST00000516912 103 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC239860.2-201ENST00000525886 270 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 CASP1P1-201ENST00000526345 212 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC008015.1-201ENST00000555505 465 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC135628.1-201ENST00000568867 534 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 UBL5P2-201ENST00000583788 219 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 VN1R90P-201ENST00000595717 726 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AL031281.1-201ENST00000604049 488 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 PRELID3BP8-201ENST00000604148 295 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC112220.3-201ENST00000605502 502 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC245297.2-201ENST00000610119 565 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC078883.4-201ENST00000623218 367 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC026422.1-201ENST00000623961 452 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AC007671.2-201ENST00000637344 619 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 MIR622-201ENST00000638396 96 ntBASIC3.22□□□□□ -1.89
RTL3Q8N8U3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.22□□□□□ -1.89
RTL3Q8N8U3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
RTL3Q8N8U3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 ZNF826P-207ENST00000622273 1910 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 MAPK10-322ENST00000641485 4530 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 RNU6-799P-201ENST00000363567 107 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 U3.11-201ENST00000364476 212 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms