Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 USP9YP20-201ENST00000419224 558 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC099563.1-201ENST00000456086 418 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 RPS15AP17-201ENST00000470598 390 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC010301.1-201ENST00000473936 355 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC106872.3-201ENST00000495104 446 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 TMEM251P1-201ENST00000503717 318 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 RNU6-445P-201ENST00000516949 107 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC103843.2-201ENST00000530523 682 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 AL359212.1-201ENST00000556608 614 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 AL845331.3-202ENST00000562856 261 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 AP001836.1-201ENST00000604675 523 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 PART1_1.1-201ENST00000611761 217 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC006504.8-201ENST00000621046 635 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SYNE4Q8N205 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SYNE4Q8N205 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SYNE4Q8N205 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SYNE4Q8N205 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC007656.2-201ENST00000624902 4547 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC000123.3-201ENST00000624029 4975 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 RNU4-79P-201ENST00000362764 141 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 Y_RNA.419-201ENST00000384041 102 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 SNORD115.1-201ENST00000391109 76 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 RNU6-952P-201ENST00000391164 108 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AL603766.1-201ENST00000407763 664 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 MIR320C1-201ENST00000408566 88 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 RN7SKP266-201ENST00000410232 287 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 RNU2-21P-201ENST00000410368 188 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AL513185.2-201ENST00000425543 193 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC005300.1-201ENST00000428401 373 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC005326.1-201ENST00000429197 123 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 RPS26P56-201ENST00000444468 240 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 RBMY2UP-201ENST00000453474 324 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 MTND1P12-201ENST00000455231 147 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC087879.1-201ENST00000474343 374 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC034159.1-201ENST00000513885 583 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 RANP9-201ENST00000519957 271 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 AL512310.1-201ENST00000548639 172 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC007621.1-201ENST00000604544 437 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AL136363.1-201ENST00000605349 337 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC078899.5-201ENST00000612475 178 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 U4.6-201ENST00000621618 127 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 AP000553.6-201ENST00000641242 118 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 CCT4P2-201ENST00000233836 1548 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 DDX18P3-201ENST00000404856 2007 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SYNE4Q8N205 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SYNE4Q8N205 IPO8P1-201ENST00000455509 3109 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 AP002907.1-201ENST00000606361 1430 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SYNE4Q8N205 AL133383.2-201ENST00000622958 2336 ntBASIC4.54□□□□□ -1.68
SYNE4Q8N205 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SYNE4Q8N205 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNE4Q8N205 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 Y_RNA.132-201ENST00000363421 102 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 SNORD81.2-201ENST00000365153 76 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 RNU6-692P-201ENST00000384496 107 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 U3.26-201ENST00000391236 204 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC133104.1-201ENST00000429100 218 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 ELOCP18-201ENST00000434209 337 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 RPL7P54-201ENST00000438336 674 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 snoU13.7-201ENST00000459220 104 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 RPS20P20-201ENST00000460498 340 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms