Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC022018.1-201ENST00000430685 241 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 RPS6P15-201ENST00000431996 751 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 LSM1P1-201ENST00000438629 273 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AC114967.1-201ENST00000504890 259 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AC010486.2-201ENST00000505572 483 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 MTND5P4-201ENST00000514978 288 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 RNA5SP468-201ENST00000516782 93 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 RNU6-678P-201ENST00000516832 109 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 DUXAP11-201ENST00000603858 526 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AL360219.1-201ENST00000610230 366 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AL356585.4-201ENST00000623078 1229 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AC004972.1-201ENST00000623934 2209 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AC116096.1-201ENST00000566804 2314 ntBASIC3.32□□□□□ -1.88
CCDC60Q8IWA6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 MTND5P27-201ENST00000428871 1720 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 MTND4P16-201ENST00000466108 1367 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 RNU6-660P-201ENST00000364566 109 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 MTCO1P27-201ENST00000448269 226 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 snoU13.4-201ENST00000458916 104 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AC104563.1-201ENST00000476147 376 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AC034159.1-201ENST00000513885 583 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 OR5G4P-201ENST00000525251 760 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 CR383656.7-201ENST00000548164 174 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 BNIP3P23-201ENST00000599655 511 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AC072039.2-201ENST00000608883 439 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 AC103710.4-201ENST00000609301 899 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC60Q8IWA6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AL161781.1-201ENST00000354277 403 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 U3.11-201ENST00000364476 212 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RNU6-744P-201ENST00000365557 107 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RNU6-1316P-201ENST00000384242 108 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RPS15AP38-201ENST00000413110 372 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AC107081.1-201ENST00000414975 361 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AL137014.1-201ENST00000420490 1226 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 BX119904.4-201ENST00000424402 301 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 EZH2P1-201ENST00000431167 291 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AL135938.1-201ENST00000443141 297 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AC093809.1-201ENST00000509155 340 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AC119751.5-201ENST00000514077 770 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RNU1-61P-201ENST00000516107 151 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RNU6-759P-201ENST00000516740 103 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RNU6-714P-201ENST00000516963 103 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RNU6-232P-201ENST00000517144 64 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RNA5SP380-201ENST00000517190 98 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 MRPS36P5-201ENST00000551909 298 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 TRAV37-201ENST00000553906 342 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AL163153.1-201ENST00000554223 283 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 SNORD84-203ENST00000584275 78 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AC015871.2-201ENST00000603605 948 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 VIS1.1-201ENST00000610517 203 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms