Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 RNU6-1249P-201ENST00000363237 111 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 RNU5D-1-201ENST00000363299 116 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 MIR649-201ENST00000384843 97 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 AP002784.2-201ENST00000397300 549 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 HMGB1P11-201ENST00000413899 637 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AL356320.1-201ENST00000429616 163 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 MTND4LP7-201ENST00000431728 294 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 ZFAND6P1-201ENST00000434138 605 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 AL929288.2-201ENST00000446368 407 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC004022.1-201ENST00000447766 1066 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC090515.1-201ENST00000465295 476 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 TRBV12-1-201ENST00000479785 344 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 EIF4EP3-201ENST00000498782 656 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 MLLT10P2-201ENST00000506434 249 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC008549.1-201ENST00000512900 643 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC040174.2-201ENST00000602701 465 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC133794.1-201ENST00000602731 914 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 APOOP1-201ENST00000604695 592 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC013468.1-201ENST00000608680 598 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC013412.1-201ENST00000610687 192 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LRRC28Q86X40 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC098679.5-201ENST00000624394 571 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AL590396.2-201ENST00000636511 1041 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC068620.4-201ENST00000636730 1182 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 AC006020.1-201ENST00000420179 1854 ntBASIC1.94□□□□□ -2.1
LRRC28Q86X40 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.94□□□□□ -2.1
LRRC28Q86X40 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LRRC28Q86X40 AL109809.4-201ENST00000603520 2185 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LRRC28Q86X40 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LRRC28Q86X40 RNU1-73P-201ENST00000383971 164 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 VN1R51P-201ENST00000411675 945 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 Z98742.3-201ENST00000418637 326 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 AC233981.1-201ENST00000423224 461 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.93□□□□□ -2.1
LRRC28Q86X40 RPL31P54-201ENST00000429803 370 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.93□□□□□ -2.1
LRRC28Q86X40 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.93□□□□□ -2.1
LRRC28Q86X40 RPL23AP7-203ENST00000449021 469 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LRRC28Q86X40 RPL31P41-201ENST00000477967 372 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 RPS27P26-201ENST00000494583 239 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 KLRA1P-201ENST00000503499 986 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 SNORA31.18-201ENST00000517043 134 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 BTF3P12-201ENST00000519620 469 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.93□□□□□ -2.1
LRRC28Q86X40 AL138976.2-201ENST00000563989 694 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 MIR3945-201ENST00000581853 98 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 AC002984.1-201ENST00000591692 448 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 AC025588.3-201ENST00000604182 274 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 AC107294.1-201ENST00000609524 467 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.93□□□□□ -2.1
LRRC28Q86X40 AC068722.2-201ENST00000618734 544 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 AC009831.4-201ENST00000620744 325 ntBASIC1.93□□□□□ -2.1
LRRC28Q86X40 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.93□□□□□ -2.1
LRRC28Q86X40 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
LRRC28Q86X40 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LRRC28Q86X40 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.92□□□□□ -2.1
LRRC28Q86X40 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LRRC28Q86X40 AC097714.1-201ENST00000511272 1647 ntBASIC1.92□□□□□ -2.1
LRRC28Q86X40 AC009812.4-201ENST00000569134 1805 ntBASIC1.92□□□□□ -2.1
LRRC28Q86X40 RNU1-105P-201ENST00000363470 161 ntBASIC1.92□□□□□ -2.1
LRRC28Q86X40 MIR493-201ENST00000385254 89 ntBASIC1.92□□□□□ -2.1
LRRC28Q86X40 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LRRC28Q86X40 RNU6-821P-201ENST00000390995 107 ntBASIC1.92□□□□□ -2.1
LRRC28Q86X40 U3.29-201ENST00000391296 212 ntBASIC1.92□□□□□ -2.1
LRRC28Q86X40 OR51A3P-201ENST00000413596 924 ntBASIC1.92□□□□□ -2.1
LRRC28Q86X40 UBE2V1P9-201ENST00000414760 368 ntBASIC1.92□□□□□ -2.1
LRRC28Q86X40 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.92□□□□□ -2.1
LRRC28Q86X40 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.92□□□□□ -2.1
LRRC28Q86X40 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.92□□□□□ -2.1
LRRC28Q86X40 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.92□□□□□ -2.1
LRRC28Q86X40 PSPHP1-201ENST00000450062 261 ntBASIC1.92□□□□□ -2.1
LRRC28Q86X40 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.92□□□□□ -2.1
LRRC28Q86X40 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.92□□□□□ -2.1
LRRC28Q86X40 TPRKBP1-201ENST00000456243 481 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms