Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 BNIP3P8-201ENST00000597863 560 ntBASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 AC008638.3-201ENST00000603341 463 ntBASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 AL139395.1-201ENST00000603662 160 ntBASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 AC013412.1-201ENST00000610687 192 ntBASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 MIR4727-201ENST00000622232 55 ntBASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 AC091925.2-201ENST00000625059 256 ntBASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
KRT28Q7Z3Y7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 MAPK10-373ENST00000641983 6772 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 RNY4P24-201ENST00000362735 96 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 RNU6-97P-201ENST00000363387 104 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 RNU6-263P-201ENST00000363811 107 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 SNORA75-201ENST00000384158 137 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 SNORA40.3-201ENST00000390964 122 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 U3.29-201ENST00000391296 212 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 RN7SKP220-201ENST00000410611 288 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 RNU4-78P-201ENST00000410940 126 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 HMGN1P14-201ENST00000412459 517 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 USP9YP13-201ENST00000417797 480 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 RPS12P23-201ENST00000419579 400 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 FAM103A2P-201ENST00000444122 354 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 Z82190.1-201ENST00000454534 490 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 RPS20P32-201ENST00000456044 356 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC112204.1-201ENST00000502591 103 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC093677.1-201ENST00000514414 678 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 GTF3AP2-201ENST00000557014 266 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC107954.1-201ENST00000565906 727 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC087683.1-201ENST00000591187 441 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC068790.6-201ENST00000602558 258 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 uc_338.1-201ENST00000612113 180 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AL596245.1-201ENST00000618994 362 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AC099842.1-201ENST00000619919 596 ntBASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT28Q7Z3Y7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC092447.10-201ENST00000620607 1652 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 Y_RNA.234-201ENST00000364409 97 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 SNORA71.1-201ENST00000364523 117 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 RNU6-1042P-201ENST00000384204 107 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 RNU6-1207P-201ENST00000384343 107 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 RNU2-16P-201ENST00000410712 136 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC126124.2-201ENST00000413542 321 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 MTCYBP24-201ENST00000420387 1106 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 ELOCP23-201ENST00000452014 332 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AL033528.1-201ENST00000453780 140 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 snoU109.1-201ENST00000459339 135 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC146507.1-201ENST00000468335 354 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC106872.2-201ENST00000494303 480 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC091826.1-201ENST00000514065 313 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AL157394.1-201ENST00000562983 1224 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC078795.2-201ENST00000602835 1252 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC136601.2-201ENST00000604356 474 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC013562.2-201ENST00000611632 603 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC008250.2-201ENST00000615261 205 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC108479.2-201ENST00000617314 601 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 AC116096.1-201ENST00000566804 2314 ntBASIC4.36□□□□□ -1.71
KRT28Q7Z3Y7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms