Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PABPC1P6-201ENST00000445594 1829 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AC112198.2-201ENST00000426589 6996 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 RNU6-596P-201ENST00000365395 98 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 RNU6-804P-201ENST00000384286 107 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 MIR223-201ENST00000385204 110 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AC013442.1-201ENST00000397347 228 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 RNU2-15P-201ENST00000410692 191 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AC069218.2-201ENST00000411665 344 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AC092809.3-201ENST00000415453 231 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AC113412.1-201ENST00000425840 504 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AC006946.1-201ENST00000429106 328 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 CYCSP6-201ENST00000434498 302 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 RPS26P56-201ENST00000444468 240 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 NOP56P2-201ENST00000447491 769 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 RPS17P13-201ENST00000448974 407 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AL591473.1-201ENST00000464297 313 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 RN7SL188P-201ENST00000469842 285 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 SCARNA20.4-201ENST00000516969 131 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AC025884.1-201ENST00000556034 378 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 MIR4700-201ENST00000578311 74 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AC022884.2-201ENST00000578535 580 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AL158827.2-201ENST00000602494 330 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 AL691447.3-201ENST00000635020 330 ntBASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.5□□□□□ -1.53
FOXR1Q6PIV2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 SNORD50.2-201ENST00000365465 70 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 RNU6-701P-201ENST00000384059 107 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 Y_RNA.458-201ENST00000384240 102 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 RNU1-77P-201ENST00000390868 162 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 SNORD115-46-201ENST00000390982 71 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 RPL36AP10-201ENST00000421785 322 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 AP000797.2-201ENST00000475768 606 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 AP000926.1-201ENST00000479573 241 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 RPL7P23-201ENST00000493874 747 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 COX7A2P2-201ENST00000505291 250 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 HMGB3P16-201ENST00000508037 287 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 AL359273.1-201ENST00000510918 627 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 RNU6-347P-201ENST00000516658 105 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 DEFB108D-201ENST00000527787 222 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 RN7SL802P-201ENST00000577858 299 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 MIR4273-201ENST00000582824 84 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 AC005344.1-201ENST00000613391 459 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 MIR7155-201ENST00000615925 56 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 AP001273.1-201ENST00000624493 3152 ntBASIC5.49□□□□□ -1.53
FOXR1Q6PIV2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 SALL4P2-201ENST00000423288 2910 ntBASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 AL159987.1-201ENST00000347911 293 ntBASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 Y_RNA.8-201ENST00000362353 102 ntBASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 RNA5SP507-201ENST00000363603 121 ntBASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 RNU6-1117P-201ENST00000384525 104 ntBASIC5.48□□□□□ -1.53
FOXR1Q6PIV2 Y_RNA.541-201ENST00000384640 113 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms