Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 SNORD121B-201ENST00000458838 81 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC091153.1-201ENST00000466297 402 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 MTND1P3-201ENST00000484956 952 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC091516.1-201ENST00000549191 703 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC125611.2-201ENST00000551907 647 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 HSPE1P5-201ENST00000561489 272 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 COX6CP3-201ENST00000580869 223 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AL450472.3-201ENST00000615578 367 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC079597.1-201ENST00000624306 508 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 RNU1-89P-201ENST00000384592 164 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 RPL17P50-201ENST00000396131 546 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 RN7SKP159-201ENST00000410657 292 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 BX295541.1-201ENST00000417774 250 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 MTND4LP11-201ENST00000422184 280 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AL139415.2-201ENST00000431968 163 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 UBE2V1P8-201ENST00000437166 265 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 RANP8-201ENST00000444720 713 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC104308.1-201ENST00000454621 333 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 ARL2BPP6-201ENST00000512757 439 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 RNU6-314P-201ENST00000516574 104 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 RNU2-46P-201ENST00000517038 113 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 RNA5SP179-201ENST00000517284 121 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC087369.1-201ENST00000520775 996 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC107016.1-201ENST00000550463 337 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC124947.2-202ENST00000552735 133 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AL133241.1-201ENST00000556832 487 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 MIR5685-201ENST00000579080 79 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 MIR3682-201ENST00000581338 84 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 CKS1BP3-201ENST00000600888 237 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 BDH2P1-201ENST00000602288 736 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC091167.4-201ENST00000605079 184 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AC068831.7-201ENST00000616954 363 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 PISRT1-201ENST00000626175 531 ntBASIC4.42□□□□□ -1.7
LONRF3Q496Y0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LONRF3Q496Y0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AC118273.1-201ENST00000525324 3006 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 Y_RNA.554-201ENST00000384672 102 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 U3.20-201ENST00000390909 217 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 RNA5SP171-201ENST00000391071 115 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AL136372.1-201ENST00000403060 228 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 RNU6-195P-201ENST00000411352 109 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AC108734.1-201ENST00000439549 399 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AL500522.2-201ENST00000448562 343 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 RNU6-798P-201ENST00000516912 103 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AC008489.1-201ENST00000524271 483 ntBASIC4.41□□□□□ -1.7
LONRF3Q496Y0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.41□□□□□ -1.7
LONRF3Q496Y0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms