Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC010678.1-201ENST00000614118 713 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AL445264.1-201ENST00000621719 171 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AL356473.1-201ENST00000406203 1408 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AL022578.1-201ENST00000439330 1433 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 ZNF807-201ENST00000328088 1707 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 FGF7P2-201ENST00000332473 296 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 Y_RNA.97-201ENST00000363094 102 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 RNU6-777P-201ENST00000364265 104 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 RNU6-730P-201ENST00000383954 104 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AL031679.1-201ENST00000400616 525 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 RNA5SP107-201ENST00000411358 122 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AL663109.1-201ENST00000411498 844 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AIMP1P1-201ENST00000418670 937 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 HSPE1P28-201ENST00000443139 211 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 BX276092.4-201ENST00000452056 248 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC022447.3-201ENST00000506865 495 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC024589.1-201ENST00000512207 263 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC116347.2-201ENST00000514912 523 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 SCARNA13-201ENST00000516672 275 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 RN7SKP277-201ENST00000516895 283 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC006254.3-201ENST00000603353 884 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC090186.1-201ENST00000605991 572 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC103710.4-201ENST00000609301 899 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC090116.1-201ENST00000615679 446 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC027807.2-201ENST00000616099 408 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 ATP5A1P2-202ENST00000616464 443 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC009318.4-201ENST00000620496 486 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.7□□□□□ -1.82
PDS5AQ29RF7 AC084035.1-201ENST00000634543 607 ntBASIC3.7□□□□□ -1.82
PDS5AQ29RF7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AL021368.2-201ENST00000606125 5352 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 RNU5F-6P-201ENST00000362979 116 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 RNU6-289P-201ENST00000364093 107 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 SNORA75-201ENST00000384158 137 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 RNA5SP293-201ENST00000410527 113 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 RPL17P12-201ENST00000413391 526 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC109780.2-201ENST00000413467 845 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 RPL23AP22-201ENST00000437556 453 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 PAXBP1P1-201ENST00000449315 447 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 SSXP1-201ENST00000453640 473 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 CFTRP1-201ENST00000456646 183 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 RPL37P6-202ENST00000464216 403 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AP000797.1-201ENST00000478870 387 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 RPS4XP13-201ENST00000483219 789 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC106872.3-201ENST00000495104 446 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 ARL2BPP4-201ENST00000506854 471 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC093331.1-201ENST00000521474 169 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 MIR544B-201ENST00000582372 78 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC068790.6-201ENST00000602558 258 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC079089.3-201ENST00000603094 673 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AL590240.3-201ENST00000621416 943 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC004009.2-201ENST00000623016 728 ntBASIC3.69□□□□□ -1.82
PDS5AQ29RF7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.69□□□□□ -1.82
PDS5AQ29RF7 ZNF826P-207ENST00000622273 1910 ntBASIC3.68□□□□□ -1.82
PDS5AQ29RF7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PDS5AQ29RF7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDS5AQ29RF7 AC000403.1-201ENST00000613696 3585 ntBASIC3.68□□□□□ -1.82
PDS5AQ29RF7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.68□□□□□ -1.82
PDS5AQ29RF7 AC006378.2-201ENST00000623178 2476 ntBASIC3.68□□□□□ -1.82
PDS5AQ29RF7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PDS5AQ29RF7 AC097714.1-201ENST00000511272 1647 ntBASIC3.68□□□□□ -1.82
PDS5AQ29RF7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms