Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.67□□□□□ -1.98
RAB40BQ12829 RNU6-1256P-201ENST00000516539 103 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 RNU6-840P-201ENST00000517275 65 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 UBTFL10-201ENST00000528532 562 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AP000857.1-201ENST00000532151 543 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.67□□□□□ -1.98
RAB40BQ12829 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.67□□□□□ -1.98
RAB40BQ12829 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.67□□□□□ -1.98
RAB40BQ12829 MIR3922-201ENST00000585192 84 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.67□□□□□ -1.98
RAB40BQ12829 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.67□□□□□ -1.98
RAB40BQ12829 AL357094.1-201ENST00000603845 844 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AC068313.1-201ENST00000604028 1008 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AC013553.2-201ENST00000604244 589 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AC090115.4-201ENST00000609970 188 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AL050303.3-201ENST00000613704 284 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 AP002782.1-201ENST00000623107 614 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.67□□□□□ -1.98
RAB40BQ12829 AC079597.1-201ENST00000624306 508 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RAB40BQ12829 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RAB40BQ12829 FAM35CP-201ENST00000554755 2470 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RAB40BQ12829 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.67□□□□□ -1.98
RAB40BQ12829 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
RAB40BQ12829 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
RAB40BQ12829 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
RAB40BQ12829 DDX10P1-201ENST00000448545 1933 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.66□□□□□ -1.98
RAB40BQ12829 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RAB40BQ12829 AC093010.3-201ENST00000570269 15214 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RAB40BQ12829 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RAB40BQ12829 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RAB40BQ12829 AL672167.1-206ENST00000356293 943 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 RNU1-35P-201ENST00000362782 153 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 RNU1-33P-201ENST00000364249 162 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
RAB40BQ12829 CD24P4-201ENST00000382840 243 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 MIR183-201ENST00000384958 110 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RAB40BQ12829 ANAPC10P1-201ENST00000395991 556 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RAB40BQ12829 MIR887-201ENST00000401258 79 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AL008987.1-201ENST00000415528 237 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.66□□□□□ -1.98
RAB40BQ12829 MTCO2P21-201ENST00000419780 677 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.66□□□□□ -1.98
RAB40BQ12829 MTND1P32-201ENST00000433043 938 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 YWHAZP7-201ENST00000436906 631 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RAB40BQ12829 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.66□□□□□ -1.98
RAB40BQ12829 PRDX3P3-201ENST00000447765 522 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 PRSS3P4-201ENST00000453323 162 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.66□□□□□ -1.98
RAB40BQ12829 RN7SL863P-201ENST00000462370 296 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.66□□□□□ -1.98
RAB40BQ12829 AC068724.1-201ENST00000487100 792 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC034222.1-201ENST00000494052 532 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.66□□□□□ -1.98
RAB40BQ12829 TTC39CP1-201ENST00000512513 755 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.66□□□□□ -1.98
RAB40BQ12829 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.66□□□□□ -1.98
RAB40BQ12829 SCARNA15.2-201ENST00000516409 127 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 RNU5A-4P-201ENST00000516588 111 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 HMGN1P28-201ENST00000521340 364 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.66□□□□□ -1.98
RAB40BQ12829 AL133271.1-201ENST00000538229 291 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RAB40BQ12829 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.66□□□□□ -1.98
RAB40BQ12829 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.66□□□□□ -1.98
RAB40BQ12829 CCNG2P1-201ENST00000549521 1000 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC011611.1-201ENST00000552179 197 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC124947.2-202ENST00000552735 133 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC061975.8-201ENST00000587058 721 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.66□□□□□ -1.98
RAB40BQ12829 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.66□□□□□ -1.98
RAB40BQ12829 AC079089.3-201ENST00000603094 673 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC012314.7-201ENST00000619693 93 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC103706.2-201ENST00000638080 240 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC099063.3-201ENST00000642066 185 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 AC233263.6-201ENST00000631132 1963 ntBASIC2.66□□□□□ -1.98
RAB40BQ12829 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RAB40BQ12829 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RAB40BQ12829 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RAB40BQ12829 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RAB40BQ12829 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
RAB40BQ12829 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.65□□□□□ -1.99
RAB40BQ12829 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.65□□□□□ -1.99
RAB40BQ12829 SNORA23-201ENST00000365128 182 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.65□□□□□ -1.99
RAB40BQ12829 AL451062.2-201ENST00000427515 271 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AL159987.2-201ENST00000432754 307 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AC010099.1-201ENST00000455434 375 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 ANKRD26P4-201ENST00000455755 950 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.65□□□□□ -1.99
RAB40BQ12829 SNORD11.1-201ENST00000459482 85 ntBASIC2.65□□□□□ -1.99
RAB40BQ12829 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 426.6 ms