Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 DUXAP9-208ENST00000622815 614 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC073308.1-201ENST00000623696 305 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC010329.5-201ENST00000623497 2174 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 ANKRD36P1-201ENST00000344424 659 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 RNU6-270P-201ENST00000364131 105 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 BTF3P7-201ENST00000407097 488 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 UBE2V1P9-201ENST00000414760 368 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 GTF2IP20-201ENST00000431663 360 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AL451074.3-201ENST00000437709 472 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 RPL31P50-201ENST00000471002 296 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC055731.1-201ENST00000474387 401 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 MTCO2P9-201ENST00000503214 694 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC022447.3-201ENST00000506865 495 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 MRPS17P9-201ENST00000511924 393 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 MIR3162-201ENST00000581818 82 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC012254.4-201ENST00000588843 273 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AL109918.3-201ENST00000603072 338 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AL450472.3-201ENST00000615578 367 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 AC243829.7-201ENST00000633081 225 ntBASIC1.62□□□□□ -2.15
HIST1H1AQ02539 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.62□□□□□ -2.15
HIST1H1AQ02539 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 MTND4P27-201ENST00000450813 1354 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 GSTA9P-201ENST00000406231 611 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 SNORA11.4-201ENST00000408823 129 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 HMGB1P11-201ENST00000413899 637 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 VTA1P1-201ENST00000414044 866 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 LINC01347-201ENST00000417964 355 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 AC236972.1-201ENST00000433225 199 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 SDCBPP1-201ENST00000440192 890 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 FABP5P6-201ENST00000510588 409 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 RNU6-202P-201ENST00000515998 96 ntBASIC1.61□□□□□ -2.15
HIST1H1AQ02539 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.61□□□□□ -2.15
HIST1H1AQ02539 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 RNU1-73P-201ENST00000383971 164 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 RNU6-444P-201ENST00000383988 108 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 RNU6-1035P-201ENST00000384477 107 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 RNU6-220P-201ENST00000390919 107 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 KLF3P2-201ENST00000465138 268 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 HMGB3P17-201ENST00000504195 649 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 RNU6-491P-201ENST00000516099 110 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC022662.1-201ENST00000580252 331 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC007229.1-201ENST00000590455 412 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC009314.1-201ENST00000603871 304 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC004775.1-201ENST00000607389 753 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC040168.1-201ENST00000623594 991 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 U6.107-201ENST00000637108 79 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC006020.1-201ENST00000420179 1854 ntBASIC1.6□□□□□ -2.15
HIST1H1AQ02539 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.6□□□□□ -2.15
HIST1H1AQ02539 AC111188.2-201ENST00000529697 1387 ntBASIC1.59□□□□□ -2.15
HIST1H1AQ02539 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms