Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2□□□□□ -2.09
HOXC5Q00444 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2□□□□□ -2.09
HOXC5Q00444 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2□□□□□ -2.09
HOXC5Q00444 HMGB1P1-201ENST00000522557 636 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2□□□□□ -2.09
HOXC5Q00444 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2□□□□□ -2.09
HOXC5Q00444 SULT1C2P1-202ENST00000562418 459 ntBASIC2□□□□□ -2.09
HOXC5Q00444 MTCO1P40-201ENST00000574371 625 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2□□□□□ -2.09
HOXC5Q00444 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2□□□□□ -2.09
HOXC5Q00444 OR1M4P-201ENST00000589199 287 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AF131215.7-201ENST00000602443 707 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC013444.2-201ENST00000603317 787 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AL671309.1-201ENST00000603750 544 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC013562.2-201ENST00000611632 603 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC009831.4-201ENST00000620744 325 ntBASIC2□□□□□ -2.09
HOXC5Q00444 UCA1.1-201ENST00000620952 75 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2□□□□□ -2.09
HOXC5Q00444 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
HOXC5Q00444 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
HOXC5Q00444 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXC5Q00444 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HOXC5Q00444 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HOXC5Q00444 ANKRD36P1-201ENST00000344424 659 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
HOXC5Q00444 RNU6-657P-201ENST00000383904 107 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 Y_RNA.510-201ENST00000384511 114 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 SRIP2-201ENST00000428470 166 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.99□□□□□ -2.09
HOXC5Q00444 AL591719.1-201ENST00000444669 744 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 AL592447.1-201ENST00000447592 540 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 RFC5P1-201ENST00000454419 874 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 AC104164.3-201ENST00000467363 1258 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 RPL31P50-201ENST00000471002 296 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 AC109464.2-201ENST00000510242 943 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 OR5BM1P-201ENST00000512021 366 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 SNORA48.9-201ENST00000516419 162 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 ARL2BPP5-201ENST00000523141 481 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXC5Q00444 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.99□□□□□ -2.09
HOXC5Q00444 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXC5Q00444 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.99□□□□□ -2.09
HOXC5Q00444 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXC5Q00444 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXC5Q00444 VN1R9P-201ENST00000614184 867 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 AL356585.4-201ENST00000623078 1229 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 AC090772.4-201ENST00000623599 362 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 MTCO1P23-201ENST00000415223 1526 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXC5Q00444 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.99□□□□□ -2.09
HOXC5Q00444 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXC5Q00444 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXC5Q00444 AC008568.2-201ENST00000623862 2313 ntBASIC1.99□□□□□ -2.09
HOXC5Q00444 AC009812.4-201ENST00000569134 1805 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXC5Q00444 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXC5Q00444 RNU6-270P-201ENST00000364131 105 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 RNU1-91P-201ENST00000364746 163 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 MIR135A2-201ENST00000384854 100 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HOXC5Q00444 RNA5SP354-201ENST00000391247 136 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 BTF3P7-201ENST00000407097 488 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.98□□□□□ -2.09
HOXC5Q00444 RNU6-193P-201ENST00000410977 107 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 RPL27AP8-201ENST00000424277 446 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXC5Q00444 RPL7L1P10-201ENST00000427790 463 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 AL096803.2-201ENST00000450032 677 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 AC092155.2-201ENST00000454675 477 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 CDC42P1-201ENST00000456658 548 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 RNU7-140P-201ENST00000459546 60 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 AC004263.1-201ENST00000479327 332 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 MRPL42P6-201ENST00000486397 371 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 RNA5SP471-201ENST00000516971 106 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 SNORA76.2-201ENST00000517095 137 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 AC025755.1-201ENST00000521306 278 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.98□□□□□ -2.09
HOXC5Q00444 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.98□□□□□ -2.09
HOXC5Q00444 AC011611.5-201ENST00000552477 578 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXC5Q00444 AC068135.2-201ENST00000569293 1028 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 LARP7P2-201ENST00000575306 125 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 OR4K8P-201ENST00000578842 1048 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 OR4H6P-202ENST00000603819 340 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 KATNBL1P5-201ENST00000605015 517 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 MIR6840-201ENST00000611937 71 ntBASIC1.98□□□□□ -2.09
HOXC5Q00444 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC5Q00444 MIR203B-201ENST00000636080 86 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms