Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-390P-201ENST00000516259 103 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 RNU6-1220P-201ENST00000517126 108 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 MTCO2P4-201ENST00000517968 247 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 AC022616.3-201ENST00000523940 148 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CL1P78423 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CL1P78423 ARL2BPP2-201ENST00000550907 489 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 AL355836.1-201ENST00000555951 870 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CL1P78423 AP005205.1-201ENST00000563503 508 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CL1P78423 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CL1P78423 BNIP3P33-201ENST00000598912 569 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 AC078795.2-201ENST00000602835 1252 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 AC005332.10-201ENST00000612725 619 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 AC010133.1-201ENST00000615809 842 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CX3CL1P78423 AC099842.1-201ENST00000619919 596 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CL1P78423 TNPO1P3-201ENST00000436471 2662 ntBASIC3.09□□□□□ -1.91
CX3CL1P78423 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CX3CL1P78423 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CX3CL1P78423 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.09□□□□□ -1.92
CX3CL1P78423 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CX3CL1P78423 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CL1P78423 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CL1P78423 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CL1P78423 AF127577.6-201ENST00000623352 2191 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CL1P78423 AC006504.1-201ENST00000562493 3666 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 OTUD4P1-201ENST00000237841 3067 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CL1P78423 SNORA20.2-201ENST00000383922 131 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CL1P78423 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CL1P78423 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 MTCO3P41-201ENST00000414801 328 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.08□□□□□ -1.92
CX3CL1P78423 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.08□□□□□ -1.92
CX3CL1P78423 UBE2D3P2-201ENST00000424409 445 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC010975.2-201ENST00000427781 588 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC017083.1-201ENST00000428093 483 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.08□□□□□ -1.92
CX3CL1P78423 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CL1P78423 MTATP6P30-201ENST00000443540 664 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.08□□□□□ -1.92
CX3CL1P78423 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CL1P78423 AC079448.1-201ENST00000449377 373 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CL1P78423 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CL1P78423 AL359385.1-201ENST00000456509 365 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CL1P78423 AC103987.1-201ENST00000473394 348 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 RPL31P60-201ENST00000478450 367 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC138853.1-201ENST00000503549 823 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 MTND2P33-201ENST00000506452 1031 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC010460.1-201ENST00000507087 466 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 NDUFB4P9-201ENST00000511646 388 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 SCARNA15.2-201ENST00000516409 127 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 NRON-201ENST00000517270 370 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CL1P78423 OR8R1P-201ENST00000543943 764 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC128657.1-201ENST00000549459 145 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC009063.1-201ENST00000563342 702 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 MIR3167-201ENST00000579623 85 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.08□□□□□ -1.92
CX3CL1P78423 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CL1P78423 AC013476.2-201ENST00000614456 459 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC090132.2-201ENST00000615881 347 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC072046.2-201ENST00000618366 268 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CX3CL1P78423 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.08□□□□□ -1.92
CX3CL1P78423 AC110801.1-201ENST00000623590 212 ntBASIC3.08□□□□□ -1.92
CX3CL1P78423 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CL1P78423 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.08□□□□□ -1.92
CX3CL1P78423 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CX3CL1P78423 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CX3CL1P78423 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CX3CL1P78423 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CX3CL1P78423 RNU6-213P-201ENST00000384051 104 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 PPIAP31-201ENST00000405422 495 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 MIR1290-201ENST00000408735 78 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC137499.1-201ENST00000427602 88 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AL358934.1-201ENST00000432346 324 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.07□□□□□ -1.92
CX3CL1P78423 SNORA71B-202ENST00000439232 272 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.07□□□□□ -1.92
CX3CL1P78423 AC020550.1-201ENST00000447385 163 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AL136380.1-201ENST00000447970 162 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 AC006480.1-201ENST00000449887 378 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 NUTF2P7-201ENST00000453086 375 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 MTND2P24-201ENST00000453434 806 ntBASIC3.07□□□□□ -1.92
CX3CL1P78423 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms